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  5. Zm00001e016123_P001

Zm00001e016123_P001 (RR12, ARR12, Zm00001e016123)


Aliases : RR12, ARR12, Zm00001e016123

Description : B-type cytokinin ARR response activator. transcription factor (ARR-B)


Gene families : OG0000124 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000124_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e016123_P001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00208460 ARR10, RR10,... RNA biosynthesis.transcriptional activation.ARR-B... 0.05 OrthoFinder output from all 47 species
AT3G10760 No alias Homeodomain-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT4G31920 ARR10, RR10 response regulator 10 0.03 OrthoFinder output from all 47 species
Adi_g015963 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g08573 ARR11 subgroup ARR-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g07225 ARR1, RR1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g37659 LUX, PCL1 component *(LUX) of circadian clock Evening complex (EC)... 0.04 OrthoFinder output from all 47 species
Als_g15900 ARR11 subgroup ARR-B transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g21636 ARR1, RR1 subgroup ARR-B transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g51877 ARR1, RR1 subgroup ARR-B transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g14548 ARR1, RR1 subgroup ARR-B transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g13514 LUX, PCL1 component *(LUX) of circadian clock Evening complex (EC)... 0.02 OrthoFinder output from all 47 species
Aspi01Gene01000.t1 RR14, ARR14,... subgroup ARR-B transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene16230.t1 LUX, PCL1,... component *(LUX) of circadian clock Evening complex (EC)... 0.02 OrthoFinder output from all 47 species
Aspi01Gene30687.t1 RR12, ARR12,... subgroup ARR-B transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene63497.t1 ARR11, Aspi01Gene63497 subgroup ARR-B transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g57194 RR14, ARR14 subgroup ARR-B transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g59744 RR14, ARR14 subgroup ARR-B transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Ceric.1Z080900.1 MYBC1, Ceric.1Z080900 not classified & original description: pacid=50607904... 0.03 OrthoFinder output from all 47 species
Ceric.31G008400.1 Ceric.31G008400 subgroup ARR-B transcription factor & original... 0.05 OrthoFinder output from all 47 species
Dac_g02359 ARR1, RR1 subgroup ARR-B transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g01716 ARR1, RR1 subgroup ARR-B transcription factor & original description: none 0.09 OrthoFinder output from all 47 species
Dcu_g07159 ARR1, RR1 subgroup ARR-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g16643 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dde_g04897 RR12, ARR12 subgroup ARR-B transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01007550001 ARR11 RNA biosynthesis.transcriptional activation.ARR-B... 0.04 OrthoFinder output from all 47 species
GSVIVT01010300001 ARR11 RNA biosynthesis.transcriptional activation.ARR-B... 0.04 OrthoFinder output from all 47 species
GSVIVT01035903001 RR12, ARR12 RNA biosynthesis.transcriptional activation.ARR-B... 0.05 OrthoFinder output from all 47 species
LOC_Os02g55320.1 RR12, ARR12,... B-type cytokinin ARR response activator. transcription... 0.05 OrthoFinder output from all 47 species
LOC_Os03g12350.1 ARR1, RR1, LOC_Os03g12350 B-type cytokinin ARR response activator. transcription... 0.04 OrthoFinder output from all 47 species
Len_g02337 LUX, PCL1 component *(LUX) of circadian clock Evening complex (EC)... 0.02 OrthoFinder output from all 47 species
Lfl_g08772 ARR1, RR1 subgroup ARR-B transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g35357 RR12, ARR12 subgroup ARR-B transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
MA_83273g0010 ARR1, RR1 B-type cytokinin ARR response activator. transcription... 0.03 OrthoFinder output from all 47 species
MA_9051g0010 ARR1, RR1 B-type cytokinin ARR response activator. transcription... 0.03 OrthoFinder output from all 47 species
MA_92689g0020 RR14, ARR14 B-type cytokinin ARR response activator. transcription... 0.03 OrthoFinder output from all 47 species
Mp4g20600.1 ARR1, RR1 B-type cytokinin ARR response activator. transcription... 0.03 OrthoFinder output from all 47 species
Mp4g21220.1 LUX, PCL1 component LUX of circadian clock Evening complex (EC) 0.02 OrthoFinder output from all 47 species
Msp_g21083 ARR11 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g25181 ARR1, RR1 subgroup ARR-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g26540 ARR11 subgroup ARR-B transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g35598 ARR1, RR1 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g05239 LUX, PCL1 component *(LUX) of circadian clock Evening complex (EC)... 0.1 OrthoFinder output from all 47 species
Nbi_g06158 RR12, ARR12 subgroup ARR-B transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Nbi_g09918 MYBC1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g02469 RR2, ARR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g18795 ARR1, RR1 subgroup ARR-B transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g20416 ARR11 subgroup ARR-B transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Pir_g25281 ARR1, RR1 subgroup ARR-B transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g25313 RR12, ARR12 subgroup ARR-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g59048 ARR11 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g03823 LUX, PCL1 component *(LUX) of circadian clock Evening complex (EC)... 0.03 OrthoFinder output from all 47 species
Sam_g11607 No alias component *(LUX) of circadian clock Evening complex (EC)... 0.02 OrthoFinder output from all 47 species
Solyc12g010330.2.1 RR18, ARR18,... B-type cytokinin ARR response activator. transcription... 0.03 OrthoFinder output from all 47 species
Spa_g06387 ARR1, RR1 subgroup ARR-B transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g10934 ARR1, RR1 subgroup ARR-B transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g19078 ARR1, RR1 subgroup ARR-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g47537 ARR11 subgroup ARR-B transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g28299 RR12, ARR12 subgroup ARR-B transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e000887_P002 ARR1, RR1, Zm00001e000887 B-type cytokinin ARR response activator. transcription... 0.03 OrthoFinder output from all 47 species
Zm00001e013844_P002 RR12, ARR12,... B-type cytokinin ARR response activator. transcription... 0.02 OrthoFinder output from all 47 species
Zm00001e018507_P001 LUX, PCL1, Zm00001e018507 component LUX of circadian clock Evening complex (EC) 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR001005 SANT/Myb 214 264
IPR001789 Sig_transdc_resp-reg_receiver 23 132
No external refs found!