Aliases : ATCUL3A, ATCUL3, CUL3A, CUL3, Zm00001e015820
Description : scaffold component CUL3 of CUL3-BTB E3 ligase complexes
Gene families : OG0000920 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000920_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00095p00133680 | CUL3B, ATCUL3B,... | Protein degradation.peptide tagging.Ubiquitin... | 0.03 | OrthoFinder output from all 47 species | |
AT5G46210 | ATCUL4, CUL4 | cullin4 | 0.04 | OrthoFinder output from all 47 species | |
Adi_g009657 | ATCUL3A, ATCUL3,... | scaffold component *(CUL3) of CUL3-BTB E3 ligase... | 0.02 | OrthoFinder output from all 47 species | |
Adi_g082260 | ATCUL3A, ATCUL3,... | scaffold component *(CUL3) of CUL3-BTB E3 ligase... | 0.02 | OrthoFinder output from all 47 species | |
Aev_g15218 | ATCUL4, CUL4 | scaffold component *(CUL4) of CUL4-DDB1 ubiquitination... | 0.03 | OrthoFinder output from all 47 species | |
Aev_g35007 | ATCUL3A, ATCUL3,... | scaffold component *(CUL3) of CUL3-BTB E3 ligase... | 0.02 | OrthoFinder output from all 47 species | |
Ala_g02559 | ATCUL4, CUL4 | scaffold component *(CUL4) of CUL4-DDB1 ubiquitination... | 0.03 | OrthoFinder output from all 47 species | |
Als_g15127 | ATCUL4, CUL4 | scaffold component *(CUL4) of CUL4-DDB1 ubiquitination... | 0.02 | OrthoFinder output from all 47 species | |
Aob_g08433 | ATCUL3A, ATCUL3,... | scaffold component *(CUL3) of CUL3-BTB E3 ligase... | 0.02 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00000157.110 | ATCUL4, CUL4 | Cullin-4 OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00000157.111 | ATCUL4, CUL4 | Cullin-4 OS=Arabidopsis thaliana | 0.01 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00020934.33 | CUL3B, ATCUL3B | Protein degradation.peptide tagging.Ubiquitin... | 0.01 | OrthoFinder output from all 47 species | |
Dcu_g13417 | ATCUL4, CUL4 | scaffold component *(CUL4) of CUL4-DDB1 ubiquitination... | 0.05 | OrthoFinder output from all 47 species | |
Dde_g20950 | ATCUL3A, ATCUL3,... | scaffold component *(CUL3) of CUL3-BTB E3 ligase... | 0.03 | OrthoFinder output from all 47 species | |
Pir_g14749 | ATCUL4, CUL4 | scaffold component *(CUL4) of CUL4-DDB1 ubiquitination... | 0.02 | OrthoFinder output from all 47 species | |
Ppi_g05907 | ATCUL4, CUL4 | scaffold component *(CUL4) of CUL4-DDB1 ubiquitination... | 0.03 | OrthoFinder output from all 47 species | |
Sam_g13649 | No alias | scaffold component *(CUL4) of CUL4-DDB1 ubiquitination... | 0.02 | OrthoFinder output from all 47 species | |
Smo98006 | ATCUL3A, ATCUL3,... | Protein degradation.peptide tagging.Ubiquitin... | 0.03 | OrthoFinder output from all 47 species | |
Solyc01g010820.3.1 | ATCUL3A, ATCUL3,... | scaffold component CUL3 of CUL3-BTB E3 ligase complexes | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0006511 | ubiquitin-dependent protein catabolic process | IEA | Interproscan |
MF | GO:0031625 | ubiquitin protein ligase binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000786 | nucleosome | IEP | HCCA |
BP | GO:0006325 | chromatin organization | IEP | HCCA |
BP | GO:0006334 | nucleosome assembly | IEP | HCCA |
BP | GO:0006338 | chromatin remodeling | IEP | HCCA |
BP | GO:0006886 | intracellular protein transport | IEP | HCCA |
BP | GO:0006888 | endoplasmic reticulum to Golgi vesicle-mediated transport | IEP | HCCA |
BP | GO:0008104 | protein localization | IEP | HCCA |
BP | GO:0015031 | protein transport | IEP | HCCA |
BP | GO:0016043 | cellular component organization | IEP | HCCA |
BP | GO:0016192 | vesicle-mediated transport | IEP | HCCA |
CC | GO:0018995 | host cellular component | IEP | HCCA |
BP | GO:0022607 | cellular component assembly | IEP | HCCA |
CC | GO:0030117 | membrane coat | IEP | HCCA |
CC | GO:0030120 | vesicle coat | IEP | HCCA |
CC | GO:0030127 | COPII vesicle coat | IEP | HCCA |
CC | GO:0032991 | protein-containing complex | IEP | HCCA |
CC | GO:0032993 | protein-DNA complex | IEP | HCCA |
BP | GO:0033036 | macromolecule localization | IEP | HCCA |
CC | GO:0033643 | host cell part | IEP | HCCA |
CC | GO:0033646 | host intracellular part | IEP | HCCA |
CC | GO:0033647 | host intracellular organelle | IEP | HCCA |
CC | GO:0033648 | host intracellular membrane-bounded organelle | IEP | HCCA |
BP | GO:0034728 | nucleosome organization | IEP | HCCA |
CC | GO:0042025 | host cell nucleus | IEP | HCCA |
BP | GO:0043933 | protein-containing complex organization | IEP | HCCA |
CC | GO:0044815 | DNA packaging complex | IEP | HCCA |
BP | GO:0045184 | establishment of protein localization | IEP | HCCA |
BP | GO:0046907 | intracellular transport | IEP | HCCA |
BP | GO:0048193 | Golgi vesicle transport | IEP | HCCA |
BP | GO:0051641 | cellular localization | IEP | HCCA |
BP | GO:0051649 | establishment of localization in cell | IEP | HCCA |
BP | GO:0065003 | protein-containing complex assembly | IEP | HCCA |
BP | GO:0065004 | protein-DNA complex assembly | IEP | HCCA |
BP | GO:0070727 | cellular macromolecule localization | IEP | HCCA |
BP | GO:0071702 | organic substance transport | IEP | HCCA |
BP | GO:0071705 | nitrogen compound transport | IEP | HCCA |
BP | GO:0071824 | protein-DNA complex subunit organization | IEP | HCCA |
BP | GO:0071840 | cellular component organization or biogenesis | IEP | HCCA |
CC | GO:0098796 | membrane protein complex | IEP | HCCA |
No external refs found! |