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  5. Zm00001e015483_P001

Zm00001e015483_P001 (SRCAP, PIE1, chr13,...)


Aliases : SRCAP, PIE1, chr13, Zm00001e015483

Description : ATPase component PIE1 of SWR1 chromatin remodeling complex


Gene families : OG0002986 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002986_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e015483_P001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00085p00089520 SRCAP, PIE1,... Chromatin organisation.chromatin remodeling... 0.06 OrthoFinder output from all 47 species
AT3G12810 SRCAP, PIE1, chr13 SNF2 domain-containing protein / helicase... 0.17 OrthoFinder output from all 47 species
Adi_g046504 SRCAP, PIE1, chr13 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g086891 SRCAP, PIE1, chr13 ATPase component *(PIE1) of SWR1 chromatin remodeling... 0.03 OrthoFinder output from all 47 species
Aev_g17049 SRCAP, PIE1, chr13 ATPase component *(PIE1) of SWR1 chromatin remodeling... 0.04 OrthoFinder output from all 47 species
Ala_g20021 SRCAP, PIE1, chr13 ATPase component *(PIE1) of SWR1 chromatin remodeling... 0.06 OrthoFinder output from all 47 species
Ala_g21115 SRCAP, PIE1, chr13 not classified & original description: none 0.1 OrthoFinder output from all 47 species
Als_g04504 SRCAP, PIE1, chr13 ATPase component *(PIE1) of SWR1 chromatin remodeling... 0.09 OrthoFinder output from all 47 species
Als_g11978 SRCAP, PIE1, chr13 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g13991 SRCAP, PIE1, chr13 ATPase component *(PIE1) of SWR1 chromatin remodeling... 0.04 OrthoFinder output from all 47 species
Cba_g24692 SRCAP, PIE1, chr13 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ceric.22G011100.1 SRCAP, PIE1,... ATPase component *(PIE1) of SWR1 chromatin remodeling... 0.19 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000194.25 SRCAP, PIE1, chr13 Chromatin organisation.chromatin remodeling... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000194.26 SRCAP, PIE1, chr13 Protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1... 0.03 OrthoFinder output from all 47 species
Cre14.g618860 SRCAP, PIE1, chr13 Chromatin organisation.chromatin remodeling... 0.05 OrthoFinder output from all 47 species
Dac_g12650 SRCAP, PIE1, chr13 ATPase component *(PIE1) of SWR1 chromatin remodeling... 0.02 OrthoFinder output from all 47 species
Dcu_g08326 SRCAP, PIE1, chr13 ATPase component *(PIE1) of SWR1 chromatin remodeling... 0.09 OrthoFinder output from all 47 species
Dde_g10522 SRCAP, PIE1, chr13 component *(TFC1/Tau95) of TFIIIc transcription factor... 0.02 OrthoFinder output from all 47 species
Ehy_g22840 SRCAP, PIE1, chr13 ATPase component *(PIE1) of SWR1 chromatin remodeling... 0.04 OrthoFinder output from all 47 species
GSVIVT01033511001 SRCAP, PIE1, chr13 Protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1... 0.15 OrthoFinder output from all 47 species
Gb_04358 SRCAP, PIE1, chr13 ATPase component PIE1 of SWR1 chromatin remodeling complex 0.04 OrthoFinder output from all 47 species
Gb_30810 SRCAP, PIE1, chr13 ATPase component PIE1 of SWR1 chromatin remodeling complex 0.03 OrthoFinder output from all 47 species
Gb_30812 SRCAP, PIE1, chr13 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os02g46450.2 SRCAP, PIE1,... ATPase component PIE1 of SWR1 chromatin remodeling complex 0.14 OrthoFinder output from all 47 species
Len_g28435 SRCAP, PIE1, chr13 ATPase component *(PIE1) of SWR1 chromatin remodeling... 0.02 OrthoFinder output from all 47 species
MA_424432g0010 SRCAP, PIE1, chr13 ATPase component PIE1 of SWR1 chromatin remodeling complex 0.1 OrthoFinder output from all 47 species
MA_64269g0010 SRCAP, PIE1, chr13 Protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1... 0.09 OrthoFinder output from all 47 species
MA_9456975g0010 SRCAP, PIE1, chr13 Protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1... 0.12 OrthoFinder output from all 47 species
Mp7g15670.1 SRCAP, PIE1, chr13 ATPase component PIE1 of SWR1 chromatin remodeling complex 0.09 OrthoFinder output from all 47 species
Msp_g15065 SRCAP, PIE1, chr13 ATPase component *(PIE1) of SWR1 chromatin remodeling... 0.05 OrthoFinder output from all 47 species
Nbi_g13998 SRCAP, PIE1, chr13 ATPase component *(PIE1) of SWR1 chromatin remodeling... 0.02 OrthoFinder output from all 47 species
Nbi_g22822 SRCAP, PIE1, chr13 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g38204 SRCAP, PIE1, chr13 ATPase component *(PIE1) of SWR1 chromatin remodeling... 0.02 OrthoFinder output from all 47 species
Pir_g11854 SRCAP, PIE1, chr13 ATPase component *(PIE1) of SWR1 chromatin remodeling... 0.05 OrthoFinder output from all 47 species
Ppi_g56964 SRCAP, PIE1, chr13 ATPase component *(PIE1) of SWR1 chromatin remodeling... 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0012.g005513 SRCAP, PIE1, chr13 ATPase component *(PIE1) of SWR1 chromatin remodeling... 0.02 OrthoFinder output from all 47 species
Sam_g11626 No alias ATPase component *(PIE1) of SWR1 chromatin remodeling... 0.06 OrthoFinder output from all 47 species
Solyc03g063210.3.1 SRCAP, PIE1,... Protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1... 0.05 OrthoFinder output from all 47 species
Solyc03g063220.2.1 SRCAP, PIE1,... ATPase component PIE1 of SWR1 chromatin remodeling complex 0.19 OrthoFinder output from all 47 species
Spa_g09110 SRCAP, PIE1, chr13 ATPase component *(PIE1) of SWR1 chromatin remodeling... 0.04 OrthoFinder output from all 47 species
Tin_g20443 SRCAP, PIE1, chr13 ATPase component *(PIE1) of SWR1 chromaTin remodeling... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP HCCA
BP GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEP HCCA
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP HCCA
MF GO:0004197 cysteine-type endopeptidase activity IEP HCCA
MF GO:0004198 calcium-dependent cysteine-type endopeptidase activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0004674 protein serine/threonine kinase activity IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP HCCA
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006401 RNA catabolic process IEP HCCA
BP GO:0006402 mRNA catabolic process IEP HCCA
BP GO:0006479 protein methylation IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008170 N-methyltransferase activity IEP HCCA
BP GO:0008213 protein alkylation IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0008276 protein methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016278 lysine N-methyltransferase activity IEP HCCA
MF GO:0016279 protein-lysine N-methyltransferase activity IEP HCCA
BP GO:0016570 histone modification IEP HCCA
BP GO:0016571 histone methylation IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
BP GO:0018022 peptidyl-lysine methylation IEP HCCA
MF GO:0018024 histone lysine N-methyltransferase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018205 peptidyl-lysine modification IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
BP GO:0032259 methylation IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034655 nucleobase-containing compound catabolic process IEP HCCA
BP GO:0034968 histone lysine methylation IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0042054 histone methyltransferase activity IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR014012 HSA_dom 27 92
IPR000330 SNF2_N 501 774
IPR001650 Helicase_C 1028 1136
No external refs found!