Zm00001e014408_P001 (AT-HSFC1, HSFC1,...)

Aliases : AT-HSFC1, HSFC1, Zm00001e014408

Description : transcription factor (HSF)

Gene families : OG0000093 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000093_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Zm00001e014408_P001

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00002p00270580	AT-HSFA6B,...	RNA biosynthesis.transcriptional activation.HSF (heat...	0.02	OrthoFinder output from all 47 species
AT4G18870	No alias	E2F/DP family winged-helix DNA-binding domain	0.02	OrthoFinder output from all 47 species
AT4G36990	HSF4, HSFB1,...	heat shock factor 4	0.02	OrthoFinder output from all 47 species
AT5G43840	HSFA6A, AT-HSFA6A	heat shock transcription factor A6A	0.03	OrthoFinder output from all 47 species
AT5G54070	AT-HSFA9, HSFA9	heat shock transcription factor A9	0.03	OrthoFinder output from all 47 species
Adi_g026921	AT-HSFA6B, HSFA6B	HSF-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aev_g18790	HSFB4, SCZ, AT-HSFB4	HSF-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ala_g12580	AT-HSFA6B, HSFA6B	HSF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ala_g18442	AT-HSFA6B, HSFA6B	HSF-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Aob_g05891	HSFB4, SCZ, AT-HSFB4	HSF-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Cba_g78307	HSFA1B, ATHSF3,...	HSF-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ceric.05G086000.1	ATHSF1, HSF1,...	HSF-type transcription factor & original description:...	0.05	OrthoFinder output from all 47 species
Dcu_g42490	HSFB4, SCZ, AT-HSFB4	HSF-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Dde_g00786	HSFA1E, ATHSFA1E	transcriptional regulator *(HsfA1) & original description: none	0.02	OrthoFinder output from all 47 species
Dde_g21083	HSFB4, SCZ, AT-HSFB4	HSF-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
LOC_Os01g39020.1	HSFA2, ATHSFA2,...	transcription factor (HSF)	0.08	OrthoFinder output from all 47 species
LOC_Os02g13800.1	AT-HSFC1, HSFC1,...	transcription factor (HSF)	0.13	OrthoFinder output from all 47 species
LOC_Os03g53340.2	AT-HSFA6B,...	transcription factor (HSF)	0.03	OrthoFinder output from all 47 species
LOC_Os06g35960.1	AT-HSFC1, HSFC1,...	transcription factor (HSF)	0.04	OrthoFinder output from all 47 species
LOC_Os06g36930.1	AT-HSFA7A,...	transcription factor (HSF)	0.03	OrthoFinder output from all 47 species
LOC_Os08g43334.1	AT-HSFB2A,...	transcription factor (HSF)	0.12	OrthoFinder output from all 47 species
Lfl_g01319	HSFB4, SCZ, AT-HSFB4	HSF-type transcription factor & original description: none	0.01	OrthoFinder output from all 47 species
MA_8812600g0010	HSFB4, SCZ, AT-HSFB4	transcription factor (HSF)	0.02	OrthoFinder output from all 47 species
Msp_g19596	HSFB4, SCZ, AT-HSFB4	HSF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Msp_g24815	HSFA1B, ATHSF3,...	HSF-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Pir_g06498	HSFB4, SCZ, AT-HSFB4	HSF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Pnu_g06083	HSFB4, SCZ, AT-HSFB4	HSF-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g12599	ATHSF1, HSF1,...	HSF-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Solyc02g072000.3.1	HSF A4A,...	transcription factor (HSF)	0.02	OrthoFinder output from all 47 species
Solyc02g090820.3.1	HSF4, HSFB1,...	transcription factor (HSF)	0.02	OrthoFinder output from all 47 species
Solyc03g026020.3.1	AT-HSFB2A,...	transcription factor (HSF)	0.05	OrthoFinder output from all 47 species
Solyc07g040680.3.1	HSFA2, ATHSFA2,...	transcription factor (HSF)	0.04	OrthoFinder output from all 47 species
Spa_g55789	AT-HSFA6B, HSFA6B	HSF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g33204	ATHSFA1D, HSFA1D	HSF-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Tin_g38102	HSFA1B, ATHSF3,...	HSF-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
CC	GO:0018995	host cellular component	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
CC	GO:0033643	host cell part	None	Extended
CC	GO:0033646	host intracellular part	None	Extended
CC	GO:0033647	host intracellular organelle	None	Extended
CC	GO:0033648	host intracellular membrane-bounded organelle	None	Extended
CC	GO:0042025	host cell nucleus	IEA	Interproscan
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR000232	HSF_DNA-bd	15	104

External Links

No external refs found!

Zm00001e014408_P001 (AT-HSFC1, HSFC1,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation