- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : Zm00001e014265
Description : no hits & (original description: none)
Gene families : OG0001232 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001232_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Zm00001e014265_P001 | |
| Cluster | HCCA: Cluster_109 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G01440 | No alias | Protein of unknown function (DUF3133) | 0.03 | OrthoFinder output from all 47 species | |
| AT2G46380 | No alias | Protein of unknown function (DUF3133) | 0.05 | OrthoFinder output from all 47 species | |
| AT3G61670 | No alias | Protein of unknown function (DUF3133) | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g111278 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g13885 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g16334 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g31365 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g40153 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g43944 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene33858.t1 | Aspi01Gene33858 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0092.g043154 | No alias | not classified & original description: CDS=30-3857 | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0389.g067652 | No alias | not classified & original description: CDS=131-2617 | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.27G066700.1 | Ceric.27G066700 | not classified & original description: pacid=50605912... | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g33707 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g09221 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g16706 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01019501001 | No alias | No description available | 0.06 | OrthoFinder output from all 47 species | |
| LOC_Os02g15820.1 | LOC_Os02g15820 | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os06g33320.1 | LOC_Os06g33320 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| Len_g14781 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g08412 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g18158 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g32343 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g15168 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g47243 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g57985 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g49023 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g19328 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003677 | DNA binding | IEP | HCCA |
| MF | GO:0003779 | actin binding | IEP | HCCA |
| MF | GO:0003887 | DNA-directed DNA polymerase activity | IEP | HCCA |
| MF | GO:0004252 | serine-type endopeptidase activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| CC | GO:0005575 | cellular_component | IEP | HCCA |
| CC | GO:0005634 | nucleus | IEP | HCCA |
| BP | GO:0006355 | regulation of DNA-templated transcription | IEP | HCCA |
| BP | GO:0006644 | phospholipid metabolic process | IEP | HCCA |
| BP | GO:0006650 | glycerophospholipid metabolic process | IEP | HCCA |
| MF | GO:0008092 | cytoskeletal protein binding | IEP | HCCA |
| MF | GO:0008236 | serine-type peptidase activity | IEP | HCCA |
| BP | GO:0009719 | response to endogenous stimulus | IEP | HCCA |
| BP | GO:0009725 | response to hormone | IEP | HCCA |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | HCCA |
| BP | GO:0010033 | response to organic substance | IEP | HCCA |
| BP | GO:0010468 | regulation of gene expression | IEP | HCCA |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | HCCA |
| MF | GO:0016307 | phosphatidylinositol phosphate kinase activity | IEP | HCCA |
| MF | GO:0016779 | nucleotidyltransferase activity | IEP | HCCA |
| MF | GO:0017171 | serine hydrolase activity | IEP | HCCA |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0019222 | regulation of metabolic process | IEP | HCCA |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | HCCA |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | HCCA |
| MF | GO:0034061 | DNA polymerase activity | IEP | HCCA |
| BP | GO:0042221 | response to chemical | IEP | HCCA |
| CC | GO:0043226 | organelle | IEP | HCCA |
| CC | GO:0043227 | membrane-bounded organelle | IEP | HCCA |
| CC | GO:0043229 | intracellular organelle | IEP | HCCA |
| CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | HCCA |
| BP | GO:0044255 | cellular lipid metabolic process | IEP | HCCA |
| BP | GO:0046486 | glycerolipid metabolic process | IEP | HCCA |
| BP | GO:0046488 | phosphatidylinositol metabolic process | IEP | HCCA |
| BP | GO:0050896 | response to stimulus | IEP | HCCA |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | HCCA |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | HCCA |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | HCCA |
| CC | GO:0110165 | cellular anatomical entity | IEP | HCCA |
| MF | GO:0140097 | catalytic activity, acting on DNA | IEP | HCCA |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | HCCA |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR021480 | Zinc_ribbon_12 | 449 | 491 |
| No external refs found! |