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Aliases : ATSAP18, SAP18, Zm00001e013500
Description : associated component SAP18 of histone deacetylase machineries
Gene families : OG0004148 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004148_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Zm00001e013500_P001 | |
| Cluster | HCCA: Cluster_110 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00001p00193310 | ATSAP18, SAP18,... | Chromatin organisation.histone modifications.histone... | 0.02 | OrthoFinder output from all 47 species | |
| AT2G45640 | ATSAP18, SAP18 | SIN3 associated polypeptide P18 | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g042559 | ATSAP18, SAP18 | associated component *(SAP18) of histone deacetylase... | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene08904.t1 | ATSAP18, SAP18,... | associated component *(SAP18) of histone deacetylase... | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene43007.t1 | ATSAP18, SAP18,... | associated component *(SAP18) of histone deacetylase... | 0.02 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00000663.51 | ATSAP18, SAP18 | Chromatin organisation.histone modifications.histone... | 0.01 | OrthoFinder output from all 47 species | |
| Dac_g01202 | ATSAP18, SAP18 | associated component *(SAP18) of histone deacetylase... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os02g02960.4 | ATSAP18, SAP18,... | associated component SAP18 of histone deacetylase machineries | 0.05 | OrthoFinder output from all 47 species | |
| Mp5g08820.1 | ATSAP18, SAP18 | associated component SAP18 of histone deacetylase machineries | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g56837 | ATSAP18, SAP18 | associated component *(SAP18) of histone deacetylase... | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g38727 | No alias | associated component *(SAP18) of histone deacetylase... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc05g047690.3.1 | ATSAP18, SAP18,... | associated component SAP18 of histone deacetylase machineries | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003712 | transcription coregulator activity | IEP | HCCA |
| BP | GO:0006357 | regulation of transcription by RNA polymerase II | IEP | HCCA |
| BP | GO:0006397 | mRNA processing | IEP | HCCA |
| BP | GO:0006457 | protein folding | IEP | HCCA |
| BP | GO:0016071 | mRNA metabolic process | IEP | HCCA |
| CC | GO:0016272 | prefoldin complex | IEP | HCCA |
| CC | GO:0016592 | mediator complex | IEP | HCCA |
| CC | GO:0032991 | protein-containing complex | IEP | HCCA |
| MF | GO:0051082 | unfolded protein binding | IEP | HCCA |
| CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR010516 | SAP18 | 33 | 151 |
| No external refs found! |