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  5. Zm00001e012730_P002

Zm00001e012730_P002 (Zm00001e012730)


Aliases : Zm00001e012730

Description : no hits & (original description: none)


Gene families : OG0006328 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006328_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e012730_P002

Target Alias Description ECC score Gene Family Method Actions
Aev_g20354 No alias substrate adaptor *(OZS3) of CUL4-DDB1 E3 ubiquitin... 0.02 OrthoFinder output from all 47 species
Ceric.38G039800.1 Ceric.38G039800 substrate adaptor *(OZS3) of CUL4-DDB1 E3 ubiquitin... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000704.40 No alias No description available 0.02 OrthoFinder output from all 47 species
Cre04.g217750 No alias No description available 0.02 OrthoFinder output from all 47 species
Ehy_g13247 No alias substrate adaptor *(OZS3) of CUL4-DDB1 E3 ubiquitin... 0.02 OrthoFinder output from all 47 species
LOC_Os10g32710.1 LOC_Os10g32710 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Ore_g16145 No alias substrate adaptor *(OZS3) of CUL4-DDB1 E3 ubiquitin... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0093.g019016 No alias substrate adaptor *(OZS3) of CUL4-DDB1 E3 ubiquitin... 0.02 OrthoFinder output from all 47 species
Smo410333 No alias No description available 0.03 OrthoFinder output from all 47 species
Solyc06g008110.4.1 Solyc06g008110 Transcription initiation factor TFIID subunit 5... 0.06 OrthoFinder output from all 47 species
Spa_g04434 No alias substrate adaptor *(OZS3) of CUL4-DDB1 E3 ubiquitin... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016409 palmitoyltransferase activity IEP HCCA
CC GO:0030014 CCR4-NOT complex IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 149 183
IPR001680 WD40_repeat 347 379
IPR001680 WD40_repeat 250 285
IPR001680 WD40_repeat 308 332
No external refs found!