Zm00001e010647_P001 (AtWRKY20, WRKY20,...)


Aliases : AtWRKY20, WRKY20, Zm00001e010647

Description : transcription factor (WRKY)


Gene families : OG0000020 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e010647_P001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00023p00208940 WRKY4,... RNA biosynthesis.transcriptional activation.WRKY... 0.04 OrthoFinder output from all 47 species
AT1G13960 WRKY4 WRKY DNA-binding protein 4 0.03 OrthoFinder output from all 47 species
Adi_g058124 AtWRKY20, WRKY20 WRKY-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene11216.t1 WRKY9, ATWRKY9,... WRKY-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0117.g046593 AtWRKY20, WRKY20 WRKY-type transcription factor & original description: CDS=1-1809 0.03 OrthoFinder output from all 47 species
Azfi_s0314.g064268 ATWRKY71, WRKY71 WRKY-type transcription factor & original description: CDS=1-2127 0.05 OrthoFinder output from all 47 species
Cba_g15071 ATWRKY58, WRKY58 WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.13G001000.1 WRKY3, Ceric.13G001000 WRKY-type transcription factor & original description:... 0.05 OrthoFinder output from all 47 species
Ehy_g12963 ATWRKY71, WRKY71 WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01035965001 WRKY32, ATWRKY32 RNA biosynthesis.transcriptional activation.WRKY... 0.04 OrthoFinder output from all 47 species
LOC_Os07g39480.1 AtWRKY20,... transcription factor (WRKY) 0.07 OrthoFinder output from all 47 species
Lfl_g05639 WRKY4 WRKY-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g08941 AtWRKY20, WRKY20 WRKY-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
MA_120969g0010 WRKY4 transcription factor (WRKY) 0.03 OrthoFinder output from all 47 species
MA_16118g0010 WRKY2, ATWRKY2 transcription factor (WRKY). transcription factor (WRKY33) 0.04 OrthoFinder output from all 47 species
Nbi_g04900 AtWRKY20, WRKY20 WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g09401 WRKY43, ATWRKY43 WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g31216 WRKY44, TTG2,... WRKY-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g32579 WRKY31, ATWRKY31 WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0057.g014708 WRKY1, ZAP1, ATWRKY1 WRKY-type transcription factor & original description:... 0.02 OrthoFinder output from all 47 species
Sam_g10405 No alias WRKY-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Solyc07g051840.4.1 WRKY6, ATWRKY6,... transcription factor (WRKY) 0.03 OrthoFinder output from all 47 species
Spa_g22422 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g26807 WRKY6, ATWRKY6 WRKY-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
MF GO:0043565 sequence-specific DNA binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP HCCA
MF GO:0004673 protein histidine kinase activity IEP HCCA
BP GO:0006354 DNA-templated transcription elongation IEP HCCA
BP GO:0006368 transcription elongation by RNA polymerase II IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
CC GO:0008023 transcription elongation factor complex IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016570 histone modification IEP HCCA
CC GO:0016593 Cdc73/Paf1 complex IEP HCCA
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
MF GO:0140299 small molecule sensor activity IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR003657 WRKY_dom 402 459
IPR003657 WRKY_dom 229 284
No external refs found!