Zm00001e009010_P001 (ABCG25, ATABCG25,...)

Aliases : ABCG25, ATABCG25, Zm00001e009010

Description : subfamily ABCG transporter

Gene families : OG0000438 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000438_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Zm00001e009010_P001

Target	Alias	Description	ECC score	Gene Family Method
Adi_g088059	No alias	subfamily ABCG transporter & original description: none	0.02	OrthoFinder output from all 47 species
Ala_g18590	No alias	subfamily ABCG transporter & original description: none	0.01	OrthoFinder output from all 47 species
Cba_g12167	No alias	subfamily ABCG transporter & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g09211	No alias	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g22600	No alias	subfamily ABCG transporter & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g24665	No alias	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Len_g10281	No alias	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
MA_65845g0010	No alias	subfamily ABCG transporter	0.03	OrthoFinder output from all 47 species
Nbi_g01338	No alias	subfamily ABCG transporter & original description: none	0.02	OrthoFinder output from all 47 species
Pir_g15519	No alias	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Pnu_g24756	ABCG26, WBC27	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g03210	No alias	subfamily ABCG transporter & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g63765	No alias	subfamily ABCG transporter & original description: none	0.06	OrthoFinder output from all 47 species
Sam_g14611	No alias	subfamily ABCG transporter & original description: none	0.01	OrthoFinder output from all 47 species
Tin_g12945	No alias	subfamily ABCG transporter & original description: none	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATP hydrolysis activity	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003677	DNA binding	IEP	HCCA
MF	GO:0003700	DNA-binding transcription factor activity	IEP	HCCA
BP	GO:0006355	regulation of DNA-templated transcription	IEP	HCCA
BP	GO:0009889	regulation of biosynthetic process	IEP	HCCA
BP	GO:0010468	regulation of gene expression	IEP	HCCA
BP	GO:0010556	regulation of macromolecule biosynthetic process	IEP	HCCA
MF	GO:0016757	glycosyltransferase activity	IEP	HCCA
CC	GO:0018995	host cellular component	IEP	HCCA
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	IEP	HCCA
BP	GO:0019222	regulation of metabolic process	IEP	HCCA
BP	GO:0031323	regulation of cellular metabolic process	IEP	HCCA
BP	GO:0031326	regulation of cellular biosynthetic process	IEP	HCCA
CC	GO:0033643	host cell part	IEP	HCCA
CC	GO:0033646	host intracellular part	IEP	HCCA
CC	GO:0033647	host intracellular organelle	IEP	HCCA
CC	GO:0033648	host intracellular membrane-bounded organelle	IEP	HCCA
CC	GO:0042025	host cell nucleus	IEP	HCCA
MF	GO:0043565	sequence-specific DNA binding	IEP	HCCA
BP	GO:0051171	regulation of nitrogen compound metabolic process	IEP	HCCA
BP	GO:0051252	regulation of RNA metabolic process	IEP	HCCA
BP	GO:0060255	regulation of macromolecule metabolic process	IEP	HCCA
BP	GO:0080090	regulation of primary metabolic process	IEP	HCCA
MF	GO:0140110	transcription regulator activity	IEP	HCCA
BP	GO:1903506	regulation of nucleic acid-templated transcription	IEP	HCCA
BP	GO:2001141	regulation of RNA biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR013525	ABC_2_trans	381	586
IPR003439	ABC_transporter-like_ATP-bd	78	228

External Links

No external refs found!

Zm00001e009010_P001 (ABCG25, ATABCG25,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation