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  5. Zm00001e007777_P003

Zm00001e007777_P003 (Zm00001e007777)


Aliases : Zm00001e007777

Description : Acyl-CoA-binding domain-containing protein 4 OS=Arabidopsis thaliana (sp|q9ma55|acbp4_arath : 82.4)


Gene families : OG0006308 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006308_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e007777_P003

Target Alias Description ECC score Gene Family Method Actions
AT5G50310 No alias Galactose oxidase/kelch repeat superfamily protein 0.04 OrthoFinder output from all 47 species
Azfi_s0188.g056788 No alias not classified & original description: CDS=169-2181 0.05 OrthoFinder output from all 47 species
Ceric.1Z187100.1 Ceric.1Z187100 not classified & original description: pacid=50597131... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021017.10 No alias No description available 0.04 OrthoFinder output from all 47 species
Dcu_g12046 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
GSVIVT01007548001 No alias No description available 0.07 OrthoFinder output from all 47 species
LOC_Os04g40740.1 LOC_Os04g40740 Epithiospecifier protein OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Len_g23315 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g09429 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Mp1g22040.1 No alias tRNA wybutosine-synthesizing protein 2/3/4... 0.07 OrthoFinder output from all 47 species
Nbi_g17725 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g08364 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g16569 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo235261 No alias tRNA wybutosine-synthesizing protein 2/3/4... 0.1 OrthoFinder output from all 47 species
Solyc03g111390.4.1 Solyc03g111390 tRNA wybutosine-synthesizing protein 2/3/4... 0.12 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0004832 valine-tRNA ligase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0005732 sno(s)RNA-containing ribonucleoprotein complex IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006438 valyl-tRNA aminoacylation IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0022613 ribonucleoprotein complex biogenesis IEP HCCA
CC GO:0030684 preribosome IEP HCCA
CC GO:0032040 small-subunit processome IEP HCCA
BP GO:0032259 methylation IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
CC GO:0034457 Mpp10 complex IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0042254 ribosome biogenesis IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR025183 DUF4110 562 648
No external refs found!