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  5. Zm00001e007146_P001

Zm00001e007146_P001 (Zm00001e007146)


Aliases : Zm00001e007146

Description : Probable helicase MAGATAMA 3 OS=Arabidopsis thaliana (sp|b6sfa4|maa3_arath : 171.0)


Gene families : OG0001121 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001121_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e007146_P001
Cluster HCCA: Cluster_59

Target Alias Description ECC score Gene Family Method Actions
AT5G37030 No alias P-loop containing nucleoside triphosphate hydrolases... 0.03 OrthoFinder output from all 47 species
AT5G37140 No alias P-loop containing nucleoside triphosphate hydrolases... 0.03 OrthoFinder output from all 47 species
AT5G37165 No alias No description available 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000198.1 No alias No description available 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000545.42 No alias No description available 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020629.60 No alias No description available 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021036.39 No alias No description available 0.01 OrthoFinder output from all 47 species
LOC_Os02g45910.1 LOC_Os02g45910 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os04g49270.1 LOC_Os04g49270 Probable helicase MAGATAMA 3 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os04g49310.1 LOC_Os04g49310 Probable helicase MAGATAMA 3 OS=Arabidopsis thaliana... 0.07 OrthoFinder output from all 47 species
LOC_Os04g51090.1 LOC_Os04g51090 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006298 mismatch repair IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
MF GO:0008080 N-acetyltransferase activity IEP HCCA
MF GO:0016407 acetyltransferase activity IEP HCCA
MF GO:0016410 N-acyltransferase activity IEP HCCA
MF GO:0030983 mismatched DNA binding IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
InterPro domains Description Start Stop
IPR041679 DNA2/NAM7-like_C 455 651
IPR041677 DNA2/NAM7_AAA_11 386 447
IPR041677 DNA2/NAM7_AAA_11 80 175
No external refs found!