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Aliases : Zm00001e006778
Description : component GatA of glutamyl-tRNA-dependent amidotransferase complex
Gene families : OG0005328 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005328_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Zm00001e006778_P003 | |
| Cluster | HCCA: Cluster_114 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00095p00040100 | evm_27.TU.AmTr_v1... | Protein biosynthesis.aminoacyl-tRNA synthetase... | 0.04 | OrthoFinder output from all 47 species | |
| AT3G25660 | No alias | Amidase family protein | 0.18 | OrthoFinder output from all 47 species | |
| Adi_g055235 | No alias | component *(GatA) of glutamyl-tRNA-dependent... | 0.03 | OrthoFinder output from all 47 species | |
| Als_g27327 | No alias | component *(GatA) of glutamyl-tRNA-dependent... | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g13372 | No alias | component *(GatA) of glutamyl-tRNA-dependent... | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g08123 | No alias | component *(GatA) of glutamyl-tRNA-dependent... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.09G091800.1 | Ceric.09G091800 | component *(GatA) of glutamyl-tRNA-dependent... | 0.07 | OrthoFinder output from all 47 species | |
| Cre10.g439400 | No alias | Protein biosynthesis.aminoacyl-tRNA synthetase... | 0.06 | OrthoFinder output from all 47 species | |
| Dde_g08150 | No alias | component *(GatA) of glutamyl-tRNA-dependent... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01020788001 | No alias | Protein biosynthesis.aminoacyl-tRNA synthetase... | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os04g55050.1 | LOC_Os04g55050 | component GatA of glutamyl-tRNA-dependent... | 0.15 | OrthoFinder output from all 47 species | |
| Lfl_g08069 | No alias | component *(GatA) of glutamyl-tRNA-dependent... | 0.05 | OrthoFinder output from all 47 species | |
| MA_10436166g0010 | No alias | component GatA of glutamyl-tRNA-dependent... | 0.02 | OrthoFinder output from all 47 species | |
| Mp1g01690.1 | No alias | component GatA of glutamyl-tRNA-dependent... | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g28904 | No alias | component *(GatA) of glutamyl-tRNA-dependent... | 0.05 | OrthoFinder output from all 47 species | |
| Pir_g18796 | No alias | component *(GatA) of glutamyl-tRNA-dependent... | 0.03 | OrthoFinder output from all 47 species | |
| Pp3c16_16670V3.1 | Pp3c16_16670 | Amidase family protein | 0.01 | OrthoFinder output from all 47 species | |
| Ppi_g10248 | No alias | component *(GatA) of glutamyl-tRNA-dependent... | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g39506 | No alias | component *(GatA) of glutamyl-tRNA-dependent... | 0.05 | OrthoFinder output from all 47 species | |
| Sam_g51291 | No alias | component *(GatA) of glutamyl-tRNA-dependent... | 0.03 | OrthoFinder output from all 47 species | |
| Smo440512 | No alias | Protein biosynthesis.aminoacyl-tRNA synthetase... | 0.04 | OrthoFinder output from all 47 species | |
| Solyc10g007840.3.1 | Solyc10g007840 | component GatA of glutamyl-tRNA-dependent... | 0.06 | OrthoFinder output from all 47 species | |
| Spa_g12039 | No alias | component *(GatA) of glutamyl-tRNA-dependent... | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000049 | tRNA binding | IEP | HCCA |
| MF | GO:0000166 | nucleotide binding | IEP | HCCA |
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003723 | RNA binding | IEP | HCCA |
| MF | GO:0003755 | peptidyl-prolyl cis-trans isomerase activity | IEP | HCCA |
| MF | GO:0004197 | cysteine-type endopeptidase activity | IEP | HCCA |
| MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0005525 | GTP binding | IEP | HCCA |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006352 | DNA-templated transcription initiation | IEP | HCCA |
| BP | GO:0006355 | regulation of DNA-templated transcription | IEP | HCCA |
| BP | GO:0006399 | tRNA metabolic process | IEP | HCCA |
| BP | GO:0006605 | protein targeting | IEP | HCCA |
| BP | GO:0006612 | protein targeting to membrane | IEP | HCCA |
| BP | GO:0006613 | cotranslational protein targeting to membrane | IEP | HCCA |
| BP | GO:0006614 | SRP-dependent cotranslational protein targeting to membrane | IEP | HCCA |
| MF | GO:0008234 | cysteine-type peptidase activity | IEP | HCCA |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | HCCA |
| BP | GO:0010468 | regulation of gene expression | IEP | HCCA |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
| BP | GO:0016485 | protein processing | IEP | HCCA |
| MF | GO:0016859 | cis-trans isomerase activity | IEP | HCCA |
| MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | HCCA |
| MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
| MF | GO:0019001 | guanyl nucleotide binding | IEP | HCCA |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0019222 | regulation of metabolic process | IEP | HCCA |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | HCCA |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | HCCA |
| MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
| MF | GO:0032561 | guanyl ribonucleotide binding | IEP | HCCA |
| BP | GO:0033365 | protein localization to organelle | IEP | HCCA |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
| MF | GO:0036094 | small molecule binding | IEP | HCCA |
| BP | GO:0043038 | amino acid activation | IEP | HCCA |
| BP | GO:0043039 | tRNA aminoacylation | IEP | HCCA |
| MF | GO:0043168 | anion binding | IEP | HCCA |
| BP | GO:0045047 | protein targeting to ER | IEP | HCCA |
| BP | GO:0050789 | regulation of biological process | IEP | HCCA |
| BP | GO:0050794 | regulation of cellular process | IEP | HCCA |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | HCCA |
| BP | GO:0051604 | protein maturation | IEP | HCCA |
| BP | GO:0051668 | localization within membrane | IEP | HCCA |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | HCCA |
| BP | GO:0065007 | biological regulation | IEP | HCCA |
| BP | GO:0070972 | protein localization to endoplasmic reticulum | IEP | HCCA |
| BP | GO:0071586 | CAAX-box protein processing | IEP | HCCA |
| BP | GO:0072594 | establishment of protein localization to organelle | IEP | HCCA |
| BP | GO:0072599 | establishment of protein localization to endoplasmic reticulum | IEP | HCCA |
| BP | GO:0072657 | protein localization to membrane | IEP | HCCA |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | HCCA |
| BP | GO:0090150 | establishment of protein localization to membrane | IEP | HCCA |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
| MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | HCCA |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | HCCA |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR023631 | Amidase_dom | 64 | 517 |
| No external refs found! |