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  5. Zm00001e006674_P002

Zm00001e006674_P002 (WIN2, Zm00001e006674)


Aliases : WIN2, Zm00001e006674

Description : Probable protein phosphatase 2C 45 OS=Oryza sativa subsp. japonica (sp|q7xr06|p2c45_orysj : 511.0)


Gene families : OG0000682 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000682_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e006674_P002

Target Alias Description ECC score Gene Family Method Actions
Adi_g024953 WIN2 clade F phosphatase & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g113847 WIN2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0033.g024997 WIN2 clade F phosphatase & original description: CDS=329-1078 0.02 OrthoFinder output from all 47 species
Cba_g09300 WIN2 clade F phosphatase & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g36782 WIN2 clade F phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g05678 WIN2 clade F phosphatase & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01004854001 No alias Probable protein phosphatase 2C 10 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_05051 WIN2 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Gb_23930 No alias Probable protein phosphatase 2C 52 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
Gb_37114 WIN2 Probable protein phosphatase 2C 59 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_158461g0010 No alias Probable protein phosphatase 2C 52 OS=Oryza sativa... 0.05 OrthoFinder output from all 47 species
Ore_g06016 WIN2 clade F phosphatase & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g13359 No alias clade F phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Smo178013 WIN2 Probable protein phosphatase 2C 45 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
Zm00001e013668_P001 WIN2, Zm00001e013668 Probable protein phosphatase 2C 10 OS=Oryza sativa... 0.04 OrthoFinder output from all 47 species
Zm00001e014290_P004 Zm00001e014290 Probable protein phosphatase 2C member 13, mitochondrial... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP HCCA
MF GO:0004190 aspartic-type endopeptidase activity IEP HCCA
MF GO:0004659 prenyltransferase activity IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
MF GO:0008318 protein prenyltransferase activity IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
BP GO:0018342 protein prenylation IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
MF GO:0070001 aspartic-type peptidase activity IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0097354 prenylation IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
InterPro domains Description Start Stop
IPR001932 PPM-type_phosphatase-like_dom 55 267
No external refs found!