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  5. Zm00001e006245_P001

Zm00001e006245_P001 (AtMAN7, MAN7, Zm00001e006245)


Aliases : AtMAN7, MAN7, Zm00001e006245

Description : endo-beta-1,4-mannanase


Gene families : OG0000482 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000482_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e006245_P001
Cluster HCCA: Cluster_50

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00077p00136900 AtMAN6, MAN6,... Cell wall.hemicellulose.heteromannan.modification and... 0.03 OrthoFinder output from all 47 species
AT1G02310 MAN1 Glycosyl hydrolase superfamily protein 0.04 OrthoFinder output from all 47 species
Azfi_s0003.g007927 No alias endo-beta-1,4-mannanase & original description: CDS=171-947 0.02 OrthoFinder output from all 47 species
Cba_g10685 AtMAN7, MAN7 endo-beta-1,4-mannanase & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g14205 AtMAN6, MAN6 endo-beta-1,4-mannanase & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01030163001 AtMAN6, MAN6 Cell wall.hemicellulose.heteromannan.modification and... 0.03 OrthoFinder output from all 47 species
Gb_04336 AtMAN6, MAN6 endo-beta-1,4-mannanase 0.03 OrthoFinder output from all 47 species
Gb_08848 AtMAN6, MAN6 endo-beta-1,4-mannanase 0.03 OrthoFinder output from all 47 species
Gb_30579 AtMAN6, MAN6 endo-beta-1,4-mannanase 0.02 OrthoFinder output from all 47 species
MA_10427065g0010 AtMAN6, MAN6 endo-beta-1,4-mannanase 0.03 OrthoFinder output from all 47 species
Mp8g06310.1 AtMAN7, MAN7 endo-beta-1,4-mannanase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0004521 endoribonuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016849 phosphorus-oxygen lyase activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
MF GO:0033897 ribonuclease T2 activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
InterPro domains Description Start Stop
IPR001547 Glyco_hydro_5 51 333
No external refs found!