Zm00001e005487_P001 (Zm00001e005487)


Aliases : Zm00001e005487

Description : UV-B-induced protein At3g17800, chloroplastic OS=Arabidopsis thaliana (sp|q9lvj0|uvb31_arath : 384.0)


Gene families : OG0000927 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000927_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e005487_P001

Target Alias Description ECC score Gene Family Method Actions
AT1G48450 No alias Protein of unknown function (DUF760) 0.04 OrthoFinder output from all 47 species
Ala_g09381 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0048.g030627 No alias not classified & original description: CDS=5-1237 0.04 OrthoFinder output from all 47 species
Cba_g02550 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g32030 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.14G062400.1 Ceric.14G062400 not classified & original description: pacid=50634142... 0.03 OrthoFinder output from all 47 species
Dde_g13179 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os03g50870.1 LOC_Os03g50870 UV-B-induced protein At3g17800, chloroplastic... 0.04 OrthoFinder output from all 47 species
LOC_Os04g50860.1 LOC_Os04g50860 UV-B-induced protein At3g17800, chloroplastic... 0.03 OrthoFinder output from all 47 species
Lfl_g04688 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g12217 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g16652 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo82738 No alias UV-B-induced protein At3g17800, chloroplastic... 0.03 OrthoFinder output from all 47 species
Tin_g07521 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e021482_P001 Zm00001e021482 UV-B-induced protein At3g17800, chloroplastic... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006720 isoprenoid metabolic process IEP HCCA
BP GO:0008299 isoprenoid biosynthetic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
MF GO:0010333 terpene synthase activity IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR008479 DUF760 148 273
No external refs found!