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Aliases : Zm00001e004461
Description : CBS domain-containing protein CBSX5 OS=Arabidopsis thaliana (sp|q84wq5|cbsx5_arath : 142.0)
Gene families : OG0001314 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001314_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Zm00001e004461_P002 | |
| Cluster | HCCA: Cluster_156 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00009p00266980 | evm_27.TU.AmTr_v1... | CBS domain-containing protein CBSX5 OS=Arabidopsis thaliana | 0.04 | OrthoFinder output from all 47 species | |
| AT5G53750 | No alias | CBS domain-containing protein | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g36890 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g47510 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene19388.t1 | Aspi01Gene19388 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene42056.t1 | Aspi01Gene42056 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g26567 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os10g35630.1 | LOC_Os10g35630 | CBS domain-containing protein CBSX5 OS=Arabidopsis... | 0.05 | OrthoFinder output from all 47 species | |
| MA_20447g0010 | No alias | CBS domain-containing protein CBSX5 OS=Arabidopsis... | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g10667 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g14526 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Pnu_g17808 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ppi_g63874 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0058.g014961 | No alias | not classified & original description: CDS=70-1371 | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g38544 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g52686 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e015227_P001 | Zm00001e015227 | CBS domain-containing protein CBSX5 OS=Arabidopsis... | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003677 | DNA binding | IEP | HCCA |
| MF | GO:0003700 | DNA-binding transcription factor activity | IEP | HCCA |
| MF | GO:0004842 | ubiquitin-protein transferase activity | IEP | HCCA |
| BP | GO:0006355 | regulation of DNA-templated transcription | IEP | HCCA |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | HCCA |
| BP | GO:0010468 | regulation of gene expression | IEP | HCCA |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0016567 | protein ubiquitination | IEP | HCCA |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0019222 | regulation of metabolic process | IEP | HCCA |
| MF | GO:0019787 | ubiquitin-like protein transferase activity | IEP | HCCA |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | HCCA |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | HCCA |
| BP | GO:0032446 | protein modification by small protein conjugation | IEP | HCCA |
| MF | GO:0043565 | sequence-specific DNA binding | IEP | HCCA |
| BP | GO:0050789 | regulation of biological process | IEP | HCCA |
| BP | GO:0050794 | regulation of cellular process | IEP | HCCA |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | HCCA |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | HCCA |
| BP | GO:0065007 | biological regulation | IEP | HCCA |
| BP | GO:0070647 | protein modification by small protein conjugation or removal | IEP | HCCA |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | HCCA |
| MF | GO:0140110 | transcription regulator activity | IEP | HCCA |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | HCCA |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR000644 | CBS_dom | 320 | 369 |
| No external refs found! |