- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : Zm00001e004110
Description : Probable arabinosyltransferase ARAD1 OS=Arabidopsis thaliana (sp|q6dbg8|arad1_arath : 232.0)
Gene families : OG0000774 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000774_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT3G45400 | No alias | exostosin family protein | 0.01 | OrthoFinder output from all 47 species | |
| Adi_g066481 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g04473 | ARAD1 | 1,5-alpha-arabinosyltransferase *(ARAD) & original... | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g03534 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g12253 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene28945.t1 | ARAD1, Aspi01Gene28945 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g05646 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Dcu_g26388 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g02244 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| GSVIVT01012106001 | ARAD1 | Cell wall.pectin.rhamnogalacturonan... | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g42648 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g15076 | EDA5 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0156.g023633 | No alias | not classified & original description: CDS=269-1720 | 0.03 | OrthoFinder output from all 47 species | |
| Solyc07g021410.1.1 | Solyc07g021410 | Probable arabinosyltransferase ARAD1 OS=Arabidopsis... | 0.06 | OrthoFinder output from all 47 species | |
| Solyc08g062600.3.1 | Solyc08g062600 | Probable arabinosyltransferase ARAD1 OS=Arabidopsis... | 0.05 | OrthoFinder output from all 47 species | |
| Solyc10g081430.2.1 | Solyc10g081430 | Probable arabinosyltransferase ARAD1 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g10639 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003849 | 3-deoxy-7-phosphoheptulonate synthase activity | IEP | HCCA |
| MF | GO:0004252 | serine-type endopeptidase activity | IEP | HCCA |
| MF | GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | IEP | HCCA |
| MF | GO:0004650 | polygalacturonase activity | IEP | HCCA |
| MF | GO:0005516 | calmodulin binding | IEP | HCCA |
| BP | GO:0005975 | carbohydrate metabolic process | IEP | HCCA |
| BP | GO:0009072 | aromatic amino acid metabolic process | IEP | HCCA |
| BP | GO:0009073 | aromatic amino acid family biosynthetic process | IEP | HCCA |
| MF | GO:0016765 | transferase activity, transferring alkyl or aryl (other than methyl) groups | IEP | HCCA |
| MF | GO:0016787 | hydrolase activity | IEP | HCCA |
| MF | GO:0016798 | hydrolase activity, acting on glycosyl bonds | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR040911 | Exostosin_GT47 | 126 | 445 |
| No external refs found! |