Zm00001e003794_P001 (ABF2, ATAREB1, AREB1,...)

Aliases : ABF2, ATAREB1, AREB1, Zm00001e003794

Description : transcription factor (bZIP)

Gene families : OG0000314 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000314_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Zm00001e003794_P001
Cluster	HCCA: Cluster_50

Target	Alias	Description	ECC score	Gene Family Method
AT1G45249	ABF2, ATAREB1, AREB1	abscisic acid responsive elements-binding factor 2	0.05	OrthoFinder output from all 47 species
AT3G19290	AREB2, ABF4	ABRE binding factor 4	0.03	OrthoFinder output from all 47 species
AT4G34000	DPBF5, ABF3	abscisic acid responsive elements-binding factor 3	0.06	OrthoFinder output from all 47 species
Ala_g02280	ABF2, ATAREB1, AREB1	bZIP class-A transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Ala_g32117	ABF1	bZIP class-A transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aob_g03487	ABF1	bZIP class-A transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g05469	AREB2, ABF4	bZIP class-A transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Cba_g21976	ABF2, ATAREB1, AREB1	bZIP class-A transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g02975	DPBF3, AREB3	bZIP class-A transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Dde_g26756	ABF2, ATAREB1, AREB1	bZIP class-A transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g32144	ABF1	bZIP class-A transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
GSVIVT01009485001	ABF2, ATAREB1, AREB1	RNA biosynthesis.transcriptional activation.bZIP...	0.04	OrthoFinder output from all 47 species
GSVIVT01034540001	GBF4	RNA biosynthesis.transcriptional activation.bZIP...	0.06	OrthoFinder output from all 47 species
Gb_16168	ABF2, ATAREB1, AREB1	transcription factor (bZIP)	0.07	OrthoFinder output from all 47 species
Gb_38174	ABF2, ATAREB1, AREB1	transcription factor (bZIP)	0.03	OrthoFinder output from all 47 species
LOC_Os01g64730.1	GBF4, LOC_Os01g64730	transcription factor (bZIP)	0.02	OrthoFinder output from all 47 species
LOC_Os02g52780.1	ABF2, ATAREB1,...	transcription factor (bZIP)	0.03	OrthoFinder output from all 47 species
Len_g03850	ABF2, ATAREB1, AREB1	bZIP class-A transcription factor & original description: none	0.01	OrthoFinder output from all 47 species
Len_g10696	ABF2, ATAREB1, AREB1	bZIP class-A transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Len_g18511	ABF2, ATAREB1, AREB1	bZIP class-A transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Len_g46528	ABF1	not classified & original description: none	0.02	OrthoFinder output from all 47 species
MA_18107g0010	ABF2, ATAREB1, AREB1	transcription factor (bZIP)	0.05	OrthoFinder output from all 47 species
Nbi_g07043	ABF2, ATAREB1, AREB1	bZIP class-A transcription factor & original description: none	0.01	OrthoFinder output from all 47 species
Ore_g08399	ABF2, ATAREB1, AREB1	bZIP class-A transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Pir_g02561	DPBF5, ABF3	bZIP class-A transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Pir_g43939	DPBF3, AREB3	bZIP class-A transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Pnu_g12389	ABF1	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Solyc01g104650.3.1	GBF4, Solyc01g104650	transcription factor (bZIP)	0.06	OrthoFinder output from all 47 species
Solyc04g078840.3.1	ABF2, ATAREB1,...	transcription factor (bZIP)	0.06	OrthoFinder output from all 47 species
Solyc09g009490.4.1	ABI5, GIA1,...	transcription factor (bZIP)	0.02	OrthoFinder output from all 47 species
Zm00001e015956_P002	ABF2, ATAREB1,...	transcription factor (bZIP)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
CC	GO:0018995	host cellular component	IEP	HCCA
CC	GO:0033643	host cell part	IEP	HCCA
CC	GO:0033646	host intracellular part	IEP	HCCA
CC	GO:0033647	host intracellular organelle	IEP	HCCA
CC	GO:0033648	host intracellular membrane-bounded organelle	IEP	HCCA
CC	GO:0042025	host cell nucleus	IEP	HCCA
MF	GO:0043565	sequence-specific DNA binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR004827	bZIP	468	520

External Links

No external refs found!

Zm00001e003794_P001 (ABF2, ATAREB1, AREB1,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation