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  5. Zm00001e003105_P001

Zm00001e003105_P001 (Zm00001e003105)


Aliases : Zm00001e003105

Description : Protein JINGUBANG OS=Arabidopsis thaliana (sp|o48716|jgb_arath : 272.0)


Gene families : OG0000309 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000309_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e003105_P001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00059p00197160 evm_27.TU.AmTr_v1... Protein JINGUBANG OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AT1G49450 No alias Transducin/WD40 repeat-like superfamily protein 0.03 OrthoFinder output from all 47 species
Ala_g09174 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene21045.t1 Aspi01Gene21045 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene45295.t1 Aspi01Gene45295 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_26404 No alias Protein JINGUBANG OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os01g13140.1 LOC_Os01g13140 Protein JINGUBANG OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Msp_g34011 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Pir_g45800 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g08501 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Solyc01g068250.2.1 Solyc01g068250 Protein JINGUBANG OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc05g006340.3.1 Solyc05g006340 Protein JINGUBANG OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 352 382
IPR001680 WD40_repeat 393 439
IPR001680 WD40_repeat 246 282
No external refs found!