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  5. Zm00001e002760_P001

Zm00001e002760_P001 (Zm00001e002760)


Aliases : Zm00001e002760

Description : no description available(sp|q680b7|xyn4_arath : 360.0)


Gene families : OG0001478 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001478_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e002760_P001

Target Alias Description ECC score Gene Family Method Actions
AT1G10050 No alias glycosyl hydrolase family 10 protein /... 0.02 OrthoFinder output from all 47 species
AT2G14690 No alias Glycosyl hydrolase superfamily protein 0.03 OrthoFinder output from all 47 species
AT4G08160 No alias glycosyl hydrolase family 10 protein /... 0.03 OrthoFinder output from all 47 species
AT4G33810 No alias Glycosyl hydrolase superfamily protein 0.02 OrthoFinder output from all 47 species
AT4G33820 No alias Glycosyl hydrolase superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g073081 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g25978 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g10327 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g08099 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.30G035800.1 Ceric.30G035800 not classified & original description: pacid=50607993... 0.04 OrthoFinder output from all 47 species
Ceric.30G036100.1 Ceric.30G036100 not classified & original description: pacid=50608372... 0.03 OrthoFinder output from all 47 species
Dcu_g11065 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g13207 ATXYN1, RXF12 endo-beta-1,4-xylanase & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g37891 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g13768 ATXYN1, RXF12 endo-beta-1,4-xylanase & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01037825001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01037832001 No alias No description available 0.04 OrthoFinder output from all 47 species
GSVIVT01037833001 No alias No description available 0.04 OrthoFinder output from all 47 species
Gb_02219 No alias no description available(sp|q84wt5|xyn5l_arath : 355.0) 0.03 OrthoFinder output from all 47 species
LOC_Os01g04290.1 LOC_Os01g04290 endo-beta-1,4-xylanase 0.05 OrthoFinder output from all 47 species
LOC_Os01g04300.1 ATXYN1, RXF12,... endo-beta-1,4-xylanase 0.02 OrthoFinder output from all 47 species
LOC_Os03g10469.1 LOC_Os03g10469 no description available(sp|q680b7|xyn4_arath : 358.0) 0.07 OrthoFinder output from all 47 species
LOC_Os03g10478.1 LOC_Os03g10478 no description available(sp|q84wt5|xyn5l_arath : 394.0) 0.05 OrthoFinder output from all 47 species
LOC_Os05g23350.1 LOC_Os05g23350 endo-beta-1,4-xylanase 0.03 OrthoFinder output from all 47 species
LOC_Os10g21110.1 LOC_Os10g21110 no description available(sp|q680b7|xyn4_arath : 358.0) 0.1 OrthoFinder output from all 47 species
MA_10433351g0010 No alias no description available(sp|q84wt5|xyn5l_arath : 209.0) 0.03 OrthoFinder output from all 47 species
Sam_g09327 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo420481 No alias No description available 0.04 OrthoFinder output from all 47 species
Tin_g01223 ATXYN1, RXF12 endo-beta-1,4-xylanase & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e000757_P001 Zm00001e000757 no description available(sp|q84wt5|xyn5l_arath : 397.0) 0.03 OrthoFinder output from all 47 species
Zm00001e016997_P001 Zm00001e016997 endo-beta-1,4-xylanase 0.03 OrthoFinder output from all 47 species
Zm00001e040632_P001 Zm00001e040632 no description available(sp|q680b7|xyn4_arath : 318.0) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003849 3-deoxy-7-phosphoheptulonate synthase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0004650 polygalacturonase activity IEP HCCA
MF GO:0005516 calmodulin binding IEP HCCA
BP GO:0006813 potassium ion transport IEP HCCA
BP GO:0009072 aromatic amino acid metabolic process IEP HCCA
BP GO:0009073 aromatic amino acid family biosynthetic process IEP HCCA
MF GO:0015079 potassium ion transmembrane transporter activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
BP GO:0071805 potassium ion transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR001000 GH10_dom 238 493
No external refs found!