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  5. Zm00001e001980_P001

Zm00001e001980_P001 (NF-YB3, Zm00001e001980)


Aliases : NF-YB3, Zm00001e001980

Description : component NF-YB of NF-Y transcription factor complex


Gene families : OG0000364 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000364_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e001980_P001
Cluster HCCA: Cluster_39

Target Alias Description ECC score Gene Family Method Actions
AT4G14540 NF-YB3 nuclear factor Y, subunit B3 0.03 OrthoFinder output from all 47 species
Als_g56322 NF-YB3 component *(NF-YB) of NF-Y transcription factor complex... 0.04 OrthoFinder output from all 47 species
Aop_g70431 NF-YB3 component *(NF-YB) of NF-Y transcription factor complex... 0.02 OrthoFinder output from all 47 species
Dac_g21439 NF-YB3 component *(NF-YB) of NF-Y transcription factor complex... 0.07 OrthoFinder output from all 47 species
Dcu_g23737 NF-YB3 component *(NF-YB) of NF-Y transcription factor complex... 0.07 OrthoFinder output from all 47 species
Dcu_g36953 NF-YB3 component *(NF-YB) of NF-Y transcription factor complex... 0.04 OrthoFinder output from all 47 species
Dde_g10488 NF-YB3 component *(NF-YB) of NF-Y transcription factor complex... 0.02 OrthoFinder output from all 47 species
LOC_Os07g41580.1 NF-YB3, LOC_Os07g41580 component NF-YB of NF-Y transcription factor complex 0.02 OrthoFinder output from all 47 species
Nbi_g04631 NF-YB3 component *(NF-YB) of NF-Y transcription factor complex... 0.02 OrthoFinder output from all 47 species
Ppi_g54885 NF-YB3 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0054.g014195 NF-YB3 component *(NF-YB) of NF-Y transcription factor complex... 0.05 OrthoFinder output from all 47 species
Spa_g54879 NF-YB3 component *(NF-YB) of NF-Y transcription factor complex... 0.03 OrthoFinder output from all 47 species
Tin_g21109 NF-YB3 component *(NF-YB) of NF-Y transcription factor complex... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006778 porphyrin-containing compound metabolic process IEP HCCA
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008171 O-methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
CC GO:0009507 chloroplast IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009536 plastid IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010207 photosystem II assembly IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
BP GO:0015994 chlorophyll metabolic process IEP HCCA
BP GO:0015995 chlorophyll biosynthetic process IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
BP GO:0042440 pigment metabolic process IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0046148 pigment biosynthetic process IEP HCCA
MF GO:0046406 magnesium protoporphyrin IX methyltransferase activity IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR003958 CBFA_NFYB_domain 27 91
No external refs found!