Coexpression cluster: Cluster_39 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0009521 photosystem 26.03% (19/73) 7.79 0.0 0.0
GO:0015979 photosynthesis 26.03% (19/73) 7.38 0.0 0.0
GO:0098796 membrane protein complex 28.77% (21/73) 6.05 0.0 0.0
GO:0009522 photosystem I 16.44% (12/73) 8.93 0.0 0.0
GO:0032991 protein-containing complex 30.14% (22/73) 4.45 0.0 0.0
GO:0009538 photosystem I reaction center 10.96% (8/73) 9.15 0.0 0.0
GO:0009523 photosystem II 9.59% (7/73) 6.96 0.0 0.0
GO:0009654 photosystem II oxygen evolving complex 8.22% (6/73) 7.28 0.0 0.0
GO:1990204 oxidoreductase complex 8.22% (6/73) 7.09 0.0 0.0
GO:0005575 cellular_component 30.14% (22/73) 2.49 0.0 0.0
GO:0010207 photosystem II assembly 5.48% (4/73) 8.35 0.0 0.0
GO:0019898 extrinsic component of membrane 5.48% (4/73) 6.98 0.0 0.0
GO:1902494 catalytic complex 9.59% (7/73) 4.49 0.0 0.0
GO:0044237 cellular metabolic process 27.4% (20/73) 1.97 0.0 1e-06
GO:0009987 cellular process 32.88% (24/73) 1.66 0.0 1e-06
GO:0010109 regulation of photosynthesis 2.74% (2/73) 9.15 3e-06 1.5e-05
GO:0010242 oxygen evolving activity 2.74% (2/73) 9.15 3e-06 1.5e-05
GO:0042548 regulation of photosynthesis, light reaction 2.74% (2/73) 9.15 3e-06 1.5e-05
GO:0042549 photosystem II stabilization 2.74% (2/73) 9.15 3e-06 1.5e-05
GO:0043467 regulation of generation of precursor metabolites and energy 2.74% (2/73) 9.15 3e-06 1.5e-05
GO:0008152 metabolic process 28.77% (21/73) 1.58 3e-06 1.6e-05
GO:0065003 protein-containing complex assembly 5.48% (4/73) 5.2 5e-06 2e-05
GO:0043933 protein-containing complex organization 5.48% (4/73) 4.89 1.1e-05 4.6e-05
GO:0022607 cellular component assembly 5.48% (4/73) 4.87 1.1e-05 4.7e-05
GO:0009536 plastid 2.74% (2/73) 7.57 4.5e-05 0.000173
GO:0009507 chloroplast 2.74% (2/73) 7.57 4.5e-05 0.000173
GO:0008150 biological_process 34.25% (25/73) 1.05 0.000166 0.00061
GO:0005509 calcium ion binding 5.48% (4/73) 3.61 0.000339 0.001197
GO:0016043 cellular component organization 5.48% (4/73) 3.48 0.00047 0.001605
GO:0071840 cellular component organization or biogenesis 5.48% (4/73) 3.28 0.000785 0.002591
GO:0110165 cellular anatomical entity 13.7% (10/73) 1.71 0.000911 0.00291
GO:0046406 magnesium protoporphyrin IX methyltransferase activity 1.37% (1/73) 9.15 0.001756 0.004966
GO:0015995 chlorophyll biosynthetic process 1.37% (1/73) 9.15 0.001756 0.004966
GO:0015994 chlorophyll metabolic process 1.37% (1/73) 9.15 0.001756 0.004966
GO:0009512 cytochrome b6f complex 1.37% (1/73) 9.15 0.001756 0.004966
GO:0009055 electron transfer activity 4.11% (3/73) 3.59 0.002037 0.005601
GO:0051002 ligase activity, forming nitrogen-metal bonds 1.37% (1/73) 8.15 0.003509 0.008906
GO:0016851 magnesium chelatase activity 1.37% (1/73) 8.15 0.003509 0.008906
GO:0051003 ligase activity, forming nitrogen-metal bonds, forming coordination complexes 1.37% (1/73) 8.15 0.003509 0.008906
GO:0046148 pigment biosynthetic process 1.37% (1/73) 7.57 0.005258 0.013014
GO:0070069 cytochrome complex 1.37% (1/73) 7.15 0.007005 0.016915
GO:0051536 iron-sulfur cluster binding 2.74% (2/73) 3.94 0.007569 0.017427
GO:0051540 metal cluster binding 2.74% (2/73) 3.94 0.007569 0.017427
GO:0042440 pigment metabolic process 1.37% (1/73) 6.35 0.012227 0.027511
GO:0006779 porphyrin-containing compound biosynthetic process 1.37% (1/73) 5.83 0.017422 0.038328
GO:0016491 oxidoreductase activity 8.22% (6/73) 1.51 0.018678 0.040198
GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor 1.37% (1/73) 5.69 0.019148 0.040332
GO:0071949 FAD binding 1.37% (1/73) 5.45 0.02259 0.046592
GO:0006778 porphyrin-containing compound metabolic process 1.37% (1/73) 5.35 0.024307 0.049109
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Abrodictyum obscurum HCCA Cluster_8 0.094 OrthoFinder output from all 47 species Compare
Abrodictyum obscurum HCCA Cluster_35 0.02 OrthoFinder output from all 47 species Compare
Abrodictyum obscurum HCCA Cluster_48 0.036 OrthoFinder output from all 47 species Compare
Abrodictyum obscurum HCCA Cluster_61 0.024 OrthoFinder output from all 47 species Compare
Abrodictyum obscurum HCCA Cluster_86 0.017 OrthoFinder output from all 47 species Compare
Abrodictyum obscurum HCCA Cluster_141 0.048 OrthoFinder output from all 47 species Compare
Actinostachys digitata HCCA Cluster_2 0.027 OrthoFinder output from all 47 species Compare
Actinostachys digitata HCCA Cluster_7 0.045 OrthoFinder output from all 47 species Compare
Actinostachys digitata HCCA Cluster_274 0.113 OrthoFinder output from all 47 species Compare
Angiopteris evecta HCCA Cluster_2 0.034 OrthoFinder output from all 47 species Compare
Angiopteris evecta HCCA Cluster_53 0.025 OrthoFinder output from all 47 species Compare
Angiopteris evecta HCCA Cluster_54 0.047 OrthoFinder output from all 47 species Compare
Angiopteris evecta HCCA Cluster_96 0.031 OrthoFinder output from all 47 species Compare
Azolla filiculoides HCCA Cluster_47 0.022 OrthoFinder output from all 47 species Compare
Azolla filiculoides HCCA Cluster_74 0.022 OrthoFinder output from all 47 species Compare
Azolla filiculoides HCCA Cluster_90 0.042 OrthoFinder output from all 47 species Compare
Adiantum latifolium HCCA Cluster_12 0.02 OrthoFinder output from all 47 species Compare
Adiantum latifolium HCCA Cluster_39 0.025 OrthoFinder output from all 47 species Compare
Adiantum latifolium HCCA Cluster_126 0.221 OrthoFinder output from all 47 species Compare
Alsophila latebrosa HCCA Cluster_37 0.033 OrthoFinder output from all 47 species Compare
Alsophila latebrosa HCCA Cluster_87 0.024 OrthoFinder output from all 47 species Compare
Alsophila latebrosa HCCA Cluster_213 0.055 OrthoFinder output from all 47 species Compare
Alsophila latebrosa HCCA Cluster_225 0.099 OrthoFinder output from all 47 species Compare
Amblovenatum opulentum HCCA Cluster_4 0.032 OrthoFinder output from all 47 species Compare
Amblovenatum opulentum HCCA Cluster_36 0.06 OrthoFinder output from all 47 species Compare
Amblovenatum opulentum HCCA Cluster_58 0.015 OrthoFinder output from all 47 species Compare
Amblovenatum opulentum HCCA Cluster_59 0.019 OrthoFinder output from all 47 species Compare
Amblovenatum opulentum HCCA Cluster_271 0.018 OrthoFinder output from all 47 species Compare
Amblovenatum opulentum HCCA Cluster_278 0.041 OrthoFinder output from all 47 species Compare
Amblovenatum opulentum HCCA Cluster_305 0.015 OrthoFinder output from all 47 species Compare
Amblovenatum opulentum HCCA Cluster_322 0.031 OrthoFinder output from all 47 species Compare
Alsophila spinulosa HCCA Cluster_14 0.03 OrthoFinder output from all 47 species Compare
Alsophila spinulosa HCCA Cluster_34 0.019 OrthoFinder output from all 47 species Compare
Alsophila spinulosa HCCA Cluster_89 0.019 OrthoFinder output from all 47 species Compare
Alsophila spinulosa HCCA Cluster_105 0.072 OrthoFinder output from all 47 species Compare
Amborella trichopoda HCCA Cluster_102 0.172 OrthoFinder output from all 47 species Compare
Cibotium barometz HCCA Cluster_10 0.042 OrthoFinder output from all 47 species Compare
Cibotium barometz HCCA Cluster_75 0.02 OrthoFinder output from all 47 species Compare
Cibotium barometz HCCA Cluster_288 0.03 OrthoFinder output from all 47 species Compare
Cyanophora paradoxa HCCA Cluster_37 0.035 OrthoFinder output from all 47 species Compare
Chlamydomonas reinhardtii HCCA Cluster_28 0.153 OrthoFinder output from all 47 species Compare
Chlamydomonas reinhardtii HCCA Cluster_63 0.024 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_12 0.04 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_126 0.131 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_148 0.02 OrthoFinder output from all 47 species Compare
Diplazium proliferum (Lam.) Kaulf. HCCA Cluster_26 0.027 OrthoFinder output from all 47 species Compare
Diplazium proliferum (Lam.) Kaulf. HCCA Cluster_28 0.026 OrthoFinder output from all 47 species Compare
Diplazium proliferum (Lam.) Kaulf. HCCA Cluster_99 0.026 OrthoFinder output from all 47 species Compare
Diplazium proliferum (Lam.) Kaulf. HCCA Cluster_122 0.146 OrthoFinder output from all 47 species Compare
Dicranopteris curranii HCCA Cluster_25 0.105 OrthoFinder output from all 47 species Compare
Dicranopteris curranii HCCA Cluster_26 0.031 OrthoFinder output from all 47 species Compare
Dicranopteris curranii HCCA Cluster_60 0.031 OrthoFinder output from all 47 species Compare
Dicranopteris curranii HCCA Cluster_207 0.053 OrthoFinder output from all 47 species Compare
Dicranopteris curranii HCCA Cluster_211 0.328 OrthoFinder output from all 47 species Compare
Davallia denticulata HCCA Cluster_37 0.016 OrthoFinder output from all 47 species Compare
Davallia denticulata HCCA Cluster_65 0.027 OrthoFinder output from all 47 species Compare
Davallia denticulata HCCA Cluster_114 0.066 OrthoFinder output from all 47 species Compare
Davallia denticulata HCCA Cluster_119 0.027 OrthoFinder output from all 47 species Compare
Equisetum hyemale HCCA Cluster_5 0.039 OrthoFinder output from all 47 species Compare
Equisetum hyemale HCCA Cluster_6 0.016 OrthoFinder output from all 47 species Compare
Equisetum hyemale HCCA Cluster_24 0.102 OrthoFinder output from all 47 species Compare
Equisetum hyemale HCCA Cluster_77 0.022 OrthoFinder output from all 47 species Compare
Ginkgo biloba HCCA Cluster_88 0.144 OrthoFinder output from all 47 species Compare
Lindsaea ensifolia HCCA Cluster_24 0.042 OrthoFinder output from all 47 species Compare
Lindsaea ensifolia HCCA Cluster_43 0.082 OrthoFinder output from all 47 species Compare
Lindsaea ensifolia HCCA Cluster_48 0.017 OrthoFinder output from all 47 species Compare
Lindsaea ensifolia HCCA Cluster_116 0.031 OrthoFinder output from all 47 species Compare
Lygodium flexuosum HCCA Cluster_22 0.017 OrthoFinder output from all 47 species Compare
Microlepia speluncae HCCA Cluster_34 0.123 OrthoFinder output from all 47 species Compare
Microlepia speluncae HCCA Cluster_106 0.018 OrthoFinder output from all 47 species Compare
Marchantia polymorpha HCCA Cluster_32 0.168 OrthoFinder output from all 47 species Compare
Nephrolepis biserrata HCCA Cluster_38 0.016 OrthoFinder output from all 47 species Compare
Nephrolepis biserrata HCCA Cluster_163 0.159 OrthoFinder output from all 47 species Compare
Ophioglossum reticulatum HCCA Cluster_25 0.143 OrthoFinder output from all 47 species Compare
Oryza sativa HCCA Cluster_39 0.127 OrthoFinder output from all 47 species Compare
Oryza sativa HCCA Cluster_173 0.031 OrthoFinder output from all 47 species Compare
Picea abies HCCA Cluster_124 0.072 OrthoFinder output from all 47 species Compare
Picea abies HCCA Cluster_210 0.137 OrthoFinder output from all 47 species Compare
Pleocnemia irregularis HCCA Cluster_5 0.055 OrthoFinder output from all 47 species Compare
Pleocnemia irregularis HCCA Cluster_40 0.057 OrthoFinder output from all 47 species Compare
Pleocnemia irregularis HCCA Cluster_227 0.018 OrthoFinder output from all 47 species Compare
Psilotum nudum HCCA Cluster_4 0.024 OrthoFinder output from all 47 species Compare
Psilotum nudum HCCA Cluster_30 0.018 OrthoFinder output from all 47 species Compare
Psilotum nudum HCCA Cluster_34 0.021 OrthoFinder output from all 47 species Compare
Psilotum nudum HCCA Cluster_64 0.032 OrthoFinder output from all 47 species Compare
Psilotum nudum HCCA Cluster_96 0.023 OrthoFinder output from all 47 species Compare
Psilotum nudum HCCA Cluster_99 0.02 OrthoFinder output from all 47 species Compare
Psilotum nudum HCCA Cluster_101 0.03 OrthoFinder output from all 47 species Compare
Psilotum nudum HCCA Cluster_108 0.03 OrthoFinder output from all 47 species Compare
Psilotum nudum HCCA Cluster_109 0.07 OrthoFinder output from all 47 species Compare
Physcomitrella patens HCCA Cluster_92 0.129 OrthoFinder output from all 47 species Compare
Physcomitrella patens HCCA Cluster_142 0.024 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_1 0.031 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_11 0.056 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_19 0.024 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_20 0.045 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_30 0.054 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_34 0.059 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_37 0.021 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_47 0.028 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_50 0.031 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_54 0.027 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_69 0.026 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_108 0.02 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_112 0.029 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_139 0.031 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_213 0.033 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_281 0.016 OrthoFinder output from all 47 species Compare
Salvinia molesta HCCA Cluster_7 0.105 OrthoFinder output from all 47 species Compare
Salvinia molesta HCCA Cluster_34 0.038 OrthoFinder output from all 47 species Compare
Salvinia molesta HCCA Cluster_43 0.016 OrthoFinder output from all 47 species Compare
Salvinia cucullata HCCA Cluster_3 0.074 OrthoFinder output from all 47 species Compare
Salvinia cucullata HCCA Cluster_51 0.022 OrthoFinder output from all 47 species Compare
Solanum lycopersicum HCCA Cluster_26 0.092 OrthoFinder output from all 47 species Compare
Solanum lycopersicum HCCA Cluster_133 0.019 OrthoFinder output from all 47 species Compare
Solanum lycopersicum HCCA Cluster_140 0.047 OrthoFinder output from all 47 species Compare
Selaginella moellendorffii HCCA Cluster_78 0.05 OrthoFinder output from all 47 species Compare
Stenochlaena palustris HCCA Cluster_58 0.038 OrthoFinder output from all 47 species Compare
Stenochlaena palustris HCCA Cluster_90 0.052 OrthoFinder output from all 47 species Compare
Stenochlaena palustris HCCA Cluster_170 0.026 OrthoFinder output from all 47 species Compare
Tectaria incisa HCCA Cluster_2 0.018 OrthoFinder output from all 47 species Compare
Tectaria incisa HCCA Cluster_4 0.113 OrthoFinder output from all 47 species Compare
Vitis vinifera HCCA Cluster_13 0.039 OrthoFinder output from all 47 species Compare
Vitis vinifera HCCA Cluster_79 0.11 OrthoFinder output from all 47 species Compare
Zea mays HCCA Cluster_4 0.021 OrthoFinder output from all 47 species Compare
Arabidopsis thaliana HCCA Cluster_83 0.312 OrthoFinder output from all 47 species Compare
Sequences (73) (download table)

InterPro Domains

GO Terms

Family Terms