Aliases : HIS1-3
Description : linker histone (H1)
Gene families : OG0000310 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000310_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Gb_40199 | |
Cluster | HCCA: Cluster_177 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Als_g10825 | No alias | linker histone *(H1) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Als_g60256 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Aspi01Gene23118.t1 | Aspi01Gene23118 | linker histone *(H1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aspi01Gene61452.t1 | HIS1-3, Aspi01Gene61452 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Len_g06466 | No alias | linker histone *(H1) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
MA_349682g0010 | No alias | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
MA_5243726g0010 | No alias | linker histone (H1) | 0.05 | OrthoFinder output from all 47 species | |
Ore_g06287 | No alias | linker histone *(H1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Tin_g19031 | HIS1-3 | linker histone *(H1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e030798_P003 | HON4, Zm00001e030798 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000786 | nucleosome | IEA | Interproscan |
MF | GO:0003677 | DNA binding | IEA | Interproscan |
BP | GO:0006334 | nucleosome assembly | IEA | Interproscan |
CC | GO:0042025 | host cell nucleus | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0005984 | disaccharide metabolic process | IEP | HCCA |
BP | GO:0005991 | trehalose metabolic process | IEP | HCCA |
BP | GO:0005992 | trehalose biosynthetic process | IEP | HCCA |
BP | GO:0009311 | oligosaccharide metabolic process | IEP | HCCA |
BP | GO:0009312 | oligosaccharide biosynthetic process | IEP | HCCA |
BP | GO:0016051 | carbohydrate biosynthetic process | IEP | HCCA |
BP | GO:0034637 | cellular carbohydrate biosynthetic process | IEP | HCCA |
MF | GO:0043565 | sequence-specific DNA binding | IEP | HCCA |
BP | GO:0044262 | cellular carbohydrate metabolic process | IEP | HCCA |
BP | GO:0046351 | disaccharide biosynthetic process | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR005818 | Histone_H1/H5_H15 | 66 | 133 |
No external refs found! |