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  5. Gb_39305

Gb_39305


Description : component COG2 of COG (Conserved-Oligomeric Golgi) complex


Gene families : OG0005258 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005258_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_39305
Cluster HCCA: Cluster_148

Target Alias Description ECC score Gene Family Method Actions
AT4G24840 No alias FUNCTIONS IN: molecular_function unknown; INVOLVED IN:... 0.08 OrthoFinder output from all 47 species
Adi_g057132 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05072 No alias component *(COG2) of COG (Conserved-Oligomeric Golgi)... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020614.120 No alias Vesicle trafficking.target membrane tethering.COG... 0.01 OrthoFinder output from all 47 species
Cre09.g402750 No alias Vesicle trafficking.target membrane tethering.COG... 0.02 OrthoFinder output from all 47 species
Dcu_g01680 No alias component *(COG2) of COG (Conserved-Oligomeric Golgi)... 0.03 OrthoFinder output from all 47 species
GSVIVT01008523001 No alias Vesicle trafficking.target membrane tethering.COG... 0.08 OrthoFinder output from all 47 species
LOC_Os03g63250.1 LOC_Os03g63250 component COG2 of COG (Conserved-Oligomeric Golgi) complex 0.05 OrthoFinder output from all 47 species
Lfl_g02229 No alias component *(COG2) of COG (Conserved-Oligomeric Golgi)... 0.02 OrthoFinder output from all 47 species
Mp7g10260.1 No alias component COG2 of COG (Conserved-Oligomeric Golgi) complex 0.05 OrthoFinder output from all 47 species
Ore_g05182 No alias component *(COG2) of COG (Conserved-Oligomeric Golgi)... 0.02 OrthoFinder output from all 47 species
Ore_g22761 No alias component *(COG2) of COG (Conserved-Oligomeric Golgi)... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0038.g012010 No alias component *(COG2) of COG (Conserved-Oligomeric Golgi)... 0.03 OrthoFinder output from all 47 species
Smo86129 No alias Vesicle trafficking.target membrane tethering.COG... 0.08 OrthoFinder output from all 47 species
Solyc08g006660.2.1 Solyc08g006660 component COG2 of COG (Conserved-Oligomeric Golgi) complex 0.08 OrthoFinder output from all 47 species
Zm00001e011654_P001 Zm00001e011654 component COG2 of COG (Conserved-Oligomeric Golgi) complex 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006904 vesicle docking involved in exocytosis IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0008150 biological_process IEP HCCA
CC GO:0008303 caspase complex IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0016255 attachment of GPI anchor to protein IEP HCCA
CC GO:0017119 Golgi transport complex IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
BP GO:0022406 membrane docking IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030126 COPI vesicle coat IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
CC GO:0042765 GPI-anchor transamidase complex IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0048278 vesicle docking IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051640 organelle localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
BP GO:0140029 exocytic process IEP HCCA
BP GO:0140056 organelle localization by membrane tethering IEP HCCA
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1905368 peptidase complex IEP HCCA
CC GO:1905369 endopeptidase complex IEP HCCA
InterPro domains Description Start Stop
IPR024602 COG_su2_N 31 162
IPR024603 COG_complex_COG2_C 595 722
No external refs found!