Heatmap: Cluster_148 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Ovule
Ovule, mature
Ovule, pollinated
Strobilus, female
Ovulate strobilus
Microstrobilus
Kernel
Leaf
Leaf, female
Leaf, male
Leaf, salicylic acid
Leaf, seedling
Leaf, truncation control
Leaf, truncation treatment
Leaf, water
Yellow-green stripe leaves
Green leaves
Stem
Cambium
Root
Gb_00095 (RLP57)
1.45 0.68 1.02 1.19 0.99 -0.06 -0.68 -0.8 -1.25 -1.37 -1.4 -1.33 -2.24 -1.73 -1.36 -0.76 -0.69 0.84 -0.2 -0.22
Gb_01010 (ACLA-3)
0.52 -0.25 0.95 0.97 1.72 0.63 -0.17 -0.57 -1.93 -1.82 -1.04 -0.48 -1.92 -2.02 -1.05 -1.02 -0.21 0.7 -1.89 0.53
0.82 0.6 0.88 0.99 1.01 0.4 0.06 -0.48 -1.28 -1.52 -0.8 -0.89 -1.49 -1.78 -0.83 -0.88 -0.91 0.91 -0.2 -0.17
Gb_02555 (BAM2)
1.41 0.68 1.2 0.74 1.57 -0.0 0.14 -1.01 -1.9 -1.7 -2.03 -0.96 -2.55 -2.3 -1.71 -1.56 -1.45 0.56 -0.16 0.17
Gb_02556 (BMY2)
1.25 0.12 1.1 1.05 1.58 -0.35 0.25 -1.0 -1.53 -1.23 -1.4 -0.66 -2.1 -1.65 -1.31 -1.31 -1.2 0.52 -0.65 0.27
1.63 -0.13 1.02 1.17 0.79 -0.52 -0.68 -0.36 -0.86 -0.78 -0.68 -0.97 -0.2 -0.24 -0.64 -0.61 -0.78 0.26 -1.77 -0.94
1.56 -0.29 0.67 0.97 1.52 -0.05 -1.43 -0.32 -1.62 -1.48 -1.41 -0.79 -1.83 -1.88 -1.36 -1.97 -0.81 1.16 0.13 -0.06
1.43 0.17 1.28 1.3 1.04 0.27 -0.09 -0.73 -1.38 -1.63 -1.41 -1.28 -1.54 -1.51 -1.45 -0.8 -0.84 0.16 -0.73 0.1
Gb_04009 (GPDHC1)
0.95 0.71 0.84 0.84 1.04 0.56 0.23 -0.21 -1.57 -1.54 -1.56 -0.66 -0.85 -0.95 -1.66 -1.0 -0.58 0.3 -0.32 0.06
1.74 1.6 1.89 1.9 1.85 -4.84 -5.82 -3.07 -8.22 -8.77 - -2.53 -10.87 -7.85 -14.14 -2.48 -0.4 0.37 -12.01 -7.7
1.97 0.95 1.94 1.98 2.01 -4.21 -5.39 -2.95 -8.05 -9.12 -9.86 -2.54 -10.94 -7.86 -10.01 -3.09 -0.55 0.21 -14.11 -5.54
Gb_05497 (DiT1)
1.68 -0.05 0.87 1.25 0.87 0.29 -2.47 -0.19 -0.84 -0.91 -1.46 -1.07 -0.65 -0.67 -1.4 -1.31 -0.56 0.45 -0.8 -0.13
Gb_05964 (BIOB)
0.97 0.18 0.7 1.29 1.21 -0.23 -1.07 -0.24 -1.33 -1.46 -0.85 -0.13 -1.24 -1.14 -0.71 -0.12 0.5 -0.01 -1.1 -0.27
0.53 -1.05 0.61 1.06 1.22 0.93 -1.79 -0.26 -0.65 -0.79 -1.37 -0.19 -0.47 -0.27 -1.4 -0.11 0.23 0.45 -1.06 -0.38
Gb_06836 (KAS1)
1.44 0.75 1.48 2.46 2.21 -6.23 -6.59 -2.17 -6.12 -7.36 -9.08 -2.0 -7.94 -7.62 -8.17 -3.51 -1.93 0.84 -12.05 -
Gb_06837 (KAS1)
1.5 0.15 2.05 2.52 2.15 -6.62 -7.86 -2.55 -9.85 - - -4.23 -11.61 -11.91 - -3.77 -1.56 0.08 -21.96 -5.16
1.33 0.94 0.86 0.82 1.38 -1.25 -0.6 -0.91 -2.67 -2.25 -0.44 -0.88 -2.67 -2.6 -0.57 -0.73 -0.36 0.78 -0.05 0.09
1.15 -0.03 0.6 1.04 0.96 -0.37 -0.29 -0.33 -0.85 -0.9 -0.31 -0.65 -1.22 -1.3 -0.15 -0.65 -0.78 0.59 -0.28 0.12
1.4 0.98 1.58 2.05 2.44 -5.17 -5.25 -2.87 -8.07 -7.82 -7.8 -1.58 -9.15 -7.36 -7.08 -3.67 -1.24 0.2 -2.81 -1.05
Gb_09003 (SK21)
1.26 0.62 1.18 0.88 0.93 -0.54 0.34 -0.72 -1.43 -2.13 -0.71 -1.22 -2.34 -1.84 -1.3 -0.81 -0.83 0.75 -0.07 0.26
1.31 -0.73 0.67 0.68 1.21 -0.31 -0.63 -0.49 -0.99 -1.08 -0.44 -1.02 -0.54 -0.23 -0.54 -0.35 -0.59 0.62 -0.84 0.35
Gb_09086 (DFR)
1.62 0.58 1.64 2.12 1.84 -8.17 -3.76 -2.29 -6.37 -5.74 -7.43 -1.37 -7.21 -6.09 -6.71 -1.3 -1.37 0.8 -3.77 0.1
1.5 0.8 1.69 1.37 1.51 -0.02 -4.04 -1.88 -3.52 -1.97 -3.08 -0.4 -4.94 -4.28 -2.39 -2.53 -1.54 0.88 -2.44 0.5
1.07 0.37 0.78 1.06 1.09 -0.37 -0.01 -0.61 -1.13 -1.24 -0.76 -1.3 -1.46 -1.18 -0.75 -0.23 -0.63 0.5 -0.01 0.1
Gb_10488 (HCT)
0.79 0.84 1.87 0.99 1.71 -3.54 -3.14 -0.87 -0.61 -0.81 -0.38 -1.11 -1.04 -1.44 -0.85 -2.51 -0.95 -0.29 -0.62 -0.34
1.33 1.04 0.59 1.12 0.94 0.21 -0.84 -0.74 -1.67 -2.14 -0.85 -1.73 -1.36 -1.66 -0.79 -1.04 -1.35 0.62 0.45 0.08
Gb_11012 (SIP1A)
1.1 0.44 0.99 1.18 1.13 -0.14 -0.55 -0.31 -1.3 -1.44 -0.94 -0.68 -0.49 -0.52 -0.91 -1.22 -0.45 0.2 -0.78 -0.13
Gb_11726 (KAS1)
1.66 -0.01 1.17 1.73 1.41 -0.8 -1.98 -0.66 -1.67 -1.77 -2.15 -1.96 -2.74 -2.28 -2.22 -0.21 0.02 0.69 -3.98 -0.09
1.42 -0.08 0.9 1.2 1.85 -0.26 -1.03 -0.75 -2.15 -2.0 -1.79 -1.25 -2.15 -2.0 -1.65 -0.47 -0.09 0.69 -0.68 -0.31
1.09 1.01 1.14 1.61 1.72 -0.74 0.39 -1.13 -2.1 -2.0 -2.39 -1.91 -1.86 -2.23 -2.0 -1.42 -1.87 0.52 -0.62 -0.85
Gb_12298 (SVB)
1.78 0.8 2.24 2.27 1.72 -4.93 -5.84 -2.74 -6.55 -6.33 -6.11 -2.5 -8.13 -6.72 -6.1 -3.01 -1.52 0.09 - -9.35
Gb_13063 (FKP1)
1.41 -0.18 0.95 1.39 1.08 0.68 -0.46 -0.66 -1.7 -1.65 -1.59 -0.44 -2.69 -2.49 -1.6 -1.41 -0.63 0.13 -0.61 0.76
Gb_13525 (MAP65-1)
1.7 0.66 1.33 1.0 1.48 -3.79 0.84 -1.03 -2.94 -2.88 -2.81 -2.13 -4.61 -3.77 -2.49 -2.71 -2.35 0.75 -0.08 0.7
Gb_14012 (SSI2)
1.56 -0.04 1.48 1.67 1.99 -7.36 1.59 -2.18 -8.17 -9.4 - -1.34 -10.29 -6.73 - -2.48 0.16 0.25 -13.18 -11.05
1.68 -0.01 0.63 1.16 1.46 -0.3 -1.46 -0.36 -1.5 -1.55 -1.97 -1.05 -2.62 -2.86 -1.64 -0.4 -0.48 0.83 -0.09 0.07
Gb_15076 (KAS1)
1.56 -0.45 1.49 2.58 1.98 -5.7 -4.92 -2.2 -5.66 -5.93 -8.4 -2.0 -8.02 -8.95 -7.82 -2.98 -0.5 1.1 -5.59 -5.44
1.24 0.39 0.56 1.16 1.3 0.45 -0.63 -0.62 -1.85 -1.77 -0.96 -0.56 -1.53 -1.41 -0.96 -1.14 -0.85 0.68 -0.41 0.19
0.9 -1.22 0.41 1.25 0.81 0.48 -1.62 -0.01 -0.57 -0.73 -0.34 -0.2 -0.41 -0.41 -0.3 -0.11 0.11 0.13 -1.79 -0.19
Gb_19155 (KAS III)
1.28 -0.44 0.77 1.22 0.91 -0.01 -0.97 -0.34 -1.14 -1.43 -0.79 -0.74 -0.81 -0.78 -0.83 -0.55 -0.25 0.34 -0.98 0.69
Gb_20361 (CAC2)
1.24 -0.59 0.66 1.24 1.1 0.19 -1.23 -0.29 -1.3 -1.45 -0.97 -0.82 -0.88 -0.79 -1.02 -0.23 0.04 0.45 -1.16 0.42
Gb_20987 (DPBF3)
1.17 1.0 0.96 1.34 0.67 0.15 -0.38 -0.4 -1.12 -1.03 -1.84 -1.41 -0.62 -0.71 -1.69 -1.15 -1.05 0.19 0.12 -0.49
Gb_21145 (CERK1)
1.17 1.0 0.55 1.13 1.64 -0.24 0.21 -0.94 -1.83 -2.13 -1.03 -1.36 -2.27 -1.7 -0.86 -1.49 -1.42 0.55 -0.74 0.28
Gb_21461 (NRT2.4)
1.74 0.3 1.74 1.33 2.15 -6.65 -6.0 -0.96 -3.43 -3.51 -5.9 -2.2 -6.75 -6.09 -6.55 -4.61 -0.29 1.52 -4.43 -1.49
Gb_21859 (ANS)
1.54 -2.26 0.68 2.41 2.75 -3.3 -5.56 -2.35 -7.55 -6.73 -9.87 -2.5 - -9.23 -9.68 -3.17 -1.09 -0.47 -2.01 0.22
2.08 1.21 1.77 1.33 0.92 -2.66 -5.98 -1.72 -3.66 -3.78 -1.06 -1.07 -2.63 -2.69 -0.28 -1.77 -0.61 0.83 -8.35 -2.55
1.19 -0.07 0.34 0.98 1.05 0.17 -0.65 -0.16 -0.98 -1.23 -0.22 -0.39 -0.69 -0.95 -0.24 -0.65 -0.92 0.77 -0.65 -0.42
Gb_23073 (ZWI)
1.03 1.61 0.58 1.31 1.57 -0.72 0.53 -1.16 -3.41 -3.95 -2.84 -2.55 -4.47 -3.65 -2.69 -1.15 -2.76 1.44 0.26 -2.21
Gb_23908 (KINESIN-13A)
1.64 -0.12 0.92 1.33 1.35 -0.82 -0.67 -1.08 -1.6 -1.65 -1.19 -2.35 -1.76 -1.5 -1.35 -1.07 -1.28 1.28 -0.42 -0.08
Gb_23913 (KINESIN-13A)
1.64 0.56 1.13 1.15 1.25 -0.84 -1.1 -0.81 -1.81 -1.81 -1.36 -2.48 -2.76 -2.84 -1.26 -1.39 -1.34 1.3 0.45 -0.86
0.85 0.18 0.63 0.68 0.86 -0.16 -0.69 -0.18 -0.78 -0.78 -0.39 -0.73 -0.5 -0.34 -0.3 -0.58 -0.65 0.55 -0.08 0.2
Gb_25408 (PKP1)
1.21 -0.44 0.37 1.2 0.67 0.43 -0.32 -0.29 -1.12 -1.51 -0.11 -0.9 -1.7 -1.67 -0.23 -0.31 -0.31 0.47 -0.54 0.45
Gb_25409 (PKP1)
1.06 0.06 0.7 1.39 0.7 0.63 -0.74 -0.46 -1.39 -1.51 -1.13 -0.93 -0.86 -0.99 -1.15 -0.58 -0.46 0.56 -0.18 0.2
1.13 -1.13 -0.29 1.23 0.66 0.4 -0.28 -0.28 -0.96 -1.29 0.0 -1.08 -0.27 -0.19 -0.26 -0.41 -0.35 0.35 -1.19 0.54
Gb_25418 (MOD1)
1.33 -0.06 0.98 1.48 1.24 -0.85 -0.17 -0.48 -1.28 -1.49 -0.99 -1.18 -0.85 -0.96 -0.84 -0.23 -0.55 -0.12 -0.77 -0.2
Gb_25602 (EMB3003)
1.34 -0.18 1.12 1.69 1.02 -0.59 -1.66 -0.66 -1.48 -1.42 -1.16 -0.79 -1.74 -1.51 -1.16 0.01 -0.11 0.21 -1.29 0.23
Gb_25911 (PDH-E1 ALPHA)
1.04 -0.19 0.78 1.4 1.41 -0.92 -2.5 -0.41 -1.23 -1.06 -2.03 -0.59 -1.46 -1.58 -1.83 -0.26 0.36 0.79 -1.03 0.54
Gb_26459 (DFR)
2.22 -2.45 0.31 2.43 2.65 -1.3 -5.48 -3.34 -6.78 -6.29 -5.51 -0.38 -7.06 -6.91 -7.28 -3.45 -2.02 -1.74 -2.18 -8.12
1.23 0.19 0.78 1.12 1.44 -0.26 -0.54 -0.34 -1.16 -1.52 -1.42 -0.76 -1.11 -1.3 -1.19 -1.08 -1.77 0.42 0.14 0.4
Gb_27774 (ALS1)
1.05 0.13 0.86 0.69 1.43 -0.24 0.29 -0.33 -1.87 -2.12 -0.57 -1.0 -0.41 -0.79 -0.56 -1.65 -0.39 0.89 -0.7 -0.72
Gb_29501 (CRK26)
1.7 1.12 1.75 1.65 1.9 -2.38 -4.86 -1.86 -1.15 -0.58 -1.69 -1.52 -4.81 -3.82 -1.94 -1.67 -1.01 -0.21 -9.22 -5.9
Gb_29725 (GSL5)
0.81 0.9 -0.27 0.72 0.74 0.17 -0.14 -0.47 -0.52 -0.96 -0.12 -0.75 -0.78 -0.85 -0.11 0.24 -0.31 0.5 -0.38 -0.94
Gb_29977 (LAP5)
1.8 -0.03 1.74 1.69 2.34 -7.03 -4.99 -2.13 -9.19 -11.07 - -2.13 -10.91 -8.27 - -1.6 0.68 0.55 -13.46 -9.17
Gb_30677 (PLA-I{gamma}1)
1.31 0.93 1.2 1.67 1.92 -2.84 -7.4 -0.56 -0.79 -0.4 -2.87 -1.6 -3.22 -2.22 -3.66 -1.87 -1.06 1.1 -6.34 -1.28
Gb_30905 (TUB6)
1.46 -0.58 1.31 2.5 1.7 -1.02 -1.2 -1.18 -4.22 -4.02 -4.3 -3.82 -2.58 -1.07 -3.37 -2.73 -1.97 0.78 -1.97 -1.02
Gb_32007 (BCCP)
1.13 0.49 0.72 1.93 1.28 -1.46 -1.32 -0.51 -1.85 -1.88 -1.73 -0.84 -1.3 -1.09 -1.55 -0.86 -0.35 0.68 -1.33 0.11
Gb_32340 (FAD2)
1.25 1.04 1.01 1.57 1.39 -0.13 1.39 -1.16 -4.79 -4.53 -6.14 -3.29 -6.29 -5.56 -5.66 -2.12 -1.32 1.14 -1.73 -0.77
2.22 0.05 1.68 2.24 2.06 -8.31 -5.41 -2.38 -9.59 - - -3.0 - -7.61 - -4.79 -0.81 0.18 - -3.46
1.46 0.17 1.13 1.01 1.8 -2.87 -2.1 -0.17 -2.0 -1.46 -2.73 -0.61 -4.23 -3.95 -3.04 -1.87 -0.89 1.52 0.1 -0.41
Gb_33917 (EDF4)
1.53 0.07 1.86 1.61 2.22 - -1.35 -1.64 -3.36 -2.04 -2.01 -2.47 -2.7 -4.01 -4.74 -2.04 -1.51 -0.57 -2.35 0.62
Gb_35233 (MOD1)
1.58 -0.29 1.2 1.49 1.21 -0.79 -0.16 -0.89 -1.13 -1.33 -1.16 -0.93 -1.17 -1.14 -0.97 -0.88 -0.55 0.04 -1.29 -0.19
1.33 0.72 0.64 1.15 1.09 -0.12 -0.97 -0.62 -1.55 -1.7 -0.35 -1.41 -1.99 -2.68 -0.65 -0.4 -0.94 0.73 0.0 0.12
1.53 0.56 0.55 0.88 1.0 0.28 -0.78 -0.53 -1.41 -1.35 -0.53 -1.4 -2.09 -1.86 -0.83 -0.87 -1.14 0.84 -0.06 0.25
Gb_35693 (TIC)
1.62 0.21 0.22 0.96 1.22 0.06 -0.53 -0.59 -0.97 -1.15 -0.01 -1.76 -1.06 -1.09 -0.07 -0.77 -0.81 -0.09 -0.27 -0.23
Gb_35710 (FATB)
0.68 -1.04 1.15 1.01 1.84 -1.98 -0.88 -0.97 -1.57 -0.66 -5.98 -0.8 -4.75 -3.97 -5.27 0.99 0.65 1.26 -9.82 0.21
Gb_35711 (FATB)
0.76 -0.87 0.99 1.22 2.06 -3.34 0.16 -1.71 -2.45 -1.76 -5.24 -0.41 -5.6 -4.13 -5.05 0.22 0.41 1.2 -9.67 0.67
0.85 0.04 0.2 1.15 0.95 0.38 -0.33 -0.25 -1.1 -1.27 -0.35 -0.84 -0.84 -0.75 -0.35 -0.54 -0.1 0.56 -0.43 -0.1
Gb_36240 (PERK1)
1.64 1.48 1.52 2.0 1.57 -1.95 -0.15 -2.27 -4.41 -5.36 -3.23 -2.28 -5.46 -5.5 -2.63 -2.72 -2.59 0.67 -2.97 -1.92
Gb_36243 (PERK1)
2.18 1.54 1.45 1.38 1.74 -1.69 -0.66 -1.72 -5.25 -4.62 -2.96 -2.15 -3.66 -3.92 -6.0 -3.28 -1.95 0.46 -3.49 -2.03
1.37 0.91 1.28 1.39 1.76 -0.47 -3.27 -0.49 -2.19 -2.24 -1.16 -0.96 -1.41 -1.67 -1.46 -1.47 -0.53 0.48 -1.44 -1.75
Gb_37007 (PDR12)
2.21 0.92 1.35 1.79 1.8 -3.82 -4.84 -1.64 -4.15 -4.3 -1.61 -1.54 -2.77 -2.03 -1.32 -2.36 -1.97 0.64 -13.53 -9.12
Gb_37195 (CI76)
1.1 -0.06 0.45 1.12 0.63 0.12 -0.48 -0.37 -0.4 -0.51 -1.01 -0.73 -0.33 -0.46 -0.84 -0.17 -0.1 0.42 -0.94 -0.12
0.99 0.51 0.63 0.89 0.97 -0.26 -0.49 -0.29 -0.67 -1.01 -0.07 -0.91 -1.06 -1.17 -0.12 -0.13 -0.35 0.48 -0.6 -0.62
Gb_38856 (MRH1)
1.5 1.1 1.56 1.33 1.2 -1.94 -1.04 -0.69 -1.76 -1.77 -1.76 -1.82 -2.61 -2.26 -2.74 -1.36 -1.2 0.69 -0.04 -0.32
Gb_38859 (MRH1)
1.44 1.35 1.62 0.74 0.96 -1.02 -0.75 -0.9 -1.95 -1.93 -2.67 -1.79 -2.58 -2.89 -2.3 -1.1 -1.17 0.91 0.48 -0.39
1.66 1.06 1.84 1.92 2.07 -3.47 -4.61 -1.93 -6.44 -6.62 -7.95 -1.92 -8.12 -6.1 -7.59 -2.58 -0.25 0.53 -11.88 -5.0
2.05 -0.21 3.25 -0.02 1.38 -7.77 -4.64 -1.53 -8.34 -7.55 -7.89 -3.42 -9.74 -7.48 -7.9 -3.86 -0.78 -0.51 - -4.31
1.66 1.06 1.84 1.92 2.07 -3.47 -4.61 -1.93 -6.44 -6.62 -7.95 -1.92 -8.12 -6.1 -7.59 -2.58 -0.25 0.53 -11.88 -5.0
1.66 1.06 1.84 1.92 2.07 -3.47 -4.61 -1.93 -6.44 -6.62 -7.95 -1.92 -8.12 -6.1 -7.59 -2.58 -0.25 0.53 -11.88 -5.0
Gb_39265 (CGS)
0.94 -1.19 0.52 0.94 0.73 0.37 -0.91 -0.2 -0.62 -0.59 -0.64 -0.36 -0.6 -0.85 -0.53 -0.2 0.41 0.4 -0.97 0.33
0.68 -0.16 0.4 0.8 0.7 0.0 -0.25 -0.15 -0.56 -0.52 -0.22 -0.79 -0.71 -0.79 -0.08 -0.44 -0.5 0.64 -0.18 0.32
Gb_39804 (PKP1)
1.19 -0.7 0.52 1.58 0.98 0.69 -4.43 -0.34 -1.4 -1.88 -1.37 -0.69 -2.03 -1.6 -1.69 -0.32 0.53 0.83 -0.42 -0.09
2.22 1.38 2.09 1.22 1.57 -4.91 -3.65 -1.95 -6.38 -7.19 -7.03 -1.36 -6.88 -4.44 -6.67 -2.66 -0.38 0.47 -7.82 -9.48
Gb_39852 (MYB74)
2.28 1.0 1.95 1.86 1.77 -7.88 -5.0 -2.47 -6.62 -7.13 -6.54 -2.38 -5.91 -4.93 -6.05 -3.14 -1.21 0.25 - -
1.28 0.01 0.55 1.09 0.7 -0.05 -0.68 -0.13 -0.47 -0.53 -1.0 -1.01 -0.34 -0.55 -0.86 -0.44 -0.5 0.23 -0.27 -0.07
1.19 -0.1 0.65 1.16 0.96 0.57 -0.62 0.08 -1.18 -1.18 -0.71 -0.52 -1.0 -0.69 -0.79 -0.88 -0.85 0.5 -0.38 -0.55
Gb_41216 (TMK1)
0.95 0.93 0.62 1.15 1.28 0.76 -0.1 -1.11 -1.99 -1.99 -0.99 -2.47 -2.6 -2.21 -0.91 -0.44 -0.88 0.84 -0.25 -0.17

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.