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  5. Gb_39062

Gb_39062 (ATZIP4, ZIP4)


Aliases : ATZIP4, ZIP4

Description : metal cation transporter (ZIP)


Gene families : OG0000472 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000472_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_39062

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00032p00154920 ZIP3,... Solute transport.carrier-mediated transport.ZIP... 0.03 OrthoFinder output from all 47 species
AMTR_s00032p00182180 ATIRT1, IRT1,... Solute transport.carrier-mediated transport.ZIP... 0.02 OrthoFinder output from all 47 species
AMTR_s00032p00184330 ZIP7,... Solute transport.carrier-mediated transport.ZIP... 0.04 OrthoFinder output from all 47 species
AT1G60960 IRT3, ATIRT3 iron regulated transporter 3 0.04 OrthoFinder output from all 47 species
AT3G12750 ZIP1 zinc transporter 1 precursor 0.03 OrthoFinder output from all 47 species
AT4G19680 IRT2, ATIRT2 iron regulated transporter 2 0.06 OrthoFinder output from all 47 species
AT4G19690 ATIRT1, IRT1 iron-regulated transporter 1 0.02 OrthoFinder output from all 47 species
Als_g00742 ATZIP4, ZIP4 metal cation transporter *(ZIP) & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g35439 ATZIP4, ZIP4 metal cation transporter *(ZIP) & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g00948 ZIP10 metal cation transporter *(ZIP) & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g01101 ATZIP4, ZIP4 metal cation transporter *(ZIP) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01014337001 ATIRT1, IRT1 Solute transport.carrier-mediated transport.ZIP... 0.03 OrthoFinder output from all 47 species
GSVIVT01032785001 ATZIP6, ZIP6 Solute transport.carrier-mediated transport.ZIP... 0.08 OrthoFinder output from all 47 species
Gb_06502 ZIP10 metal cation transporter (ZIP) 0.02 OrthoFinder output from all 47 species
Gb_28845 ZIP1 metal cation transporter (ZIP) 0.03 OrthoFinder output from all 47 species
LOC_Os03g46470.1 ZIP10, LOC_Os03g46470 metal cation transporter (ZIP) 0.03 OrthoFinder output from all 47 species
LOC_Os05g10940.1 ATZIP4, ZIP4,... metal cation transporter (ZIP) 0.03 OrthoFinder output from all 47 species
LOC_Os06g37010.1 ATZIP4, ZIP4,... metal cation transporter (ZIP) 0.03 OrthoFinder output from all 47 species
Len_g36026 ATZIP4, ZIP4 metal cation transporter *(ZIP) & original description: none 0.04 OrthoFinder output from all 47 species
MA_31095g0010 ATZIP4, ZIP4 metal cation transporter (ZIP) 0.04 OrthoFinder output from all 47 species
MA_6126514g0010 ZIP1 metal cation transporter (ZIP) 0.03 OrthoFinder output from all 47 species
Mp5g10490.1 ATZIP4, ZIP4 metal cation transporter (ZIP) 0.03 OrthoFinder output from all 47 species
Ore_g28648 ATZIP4, ZIP4 metal cation transporter *(ZIP) & original description: none 0.03 OrthoFinder output from all 47 species
Smo231997 ATZIP4, ZIP4 Solute transport.carrier-mediated transport.ZIP... 0.05 OrthoFinder output from all 47 species
Solyc02g069190.4.1 ZIP10, Solyc02g069190 metal cation transporter (ZIP) 0.03 OrthoFinder output from all 47 species
Solyc02g069200.3.1 ATIRT1, IRT1,... metal cation transporter (ZIP) 0.03 OrthoFinder output from all 47 species
Solyc05g053370.3.1 ATZIP6, ZIP6,... metal cation transporter (ZIP) 0.05 OrthoFinder output from all 47 species
Zm00001e005195_P002 ZIP10, Zm00001e005195 metal cation transporter (ZIP) 0.04 OrthoFinder output from all 47 species
Zm00001e006961_P001 ZIP1, Zm00001e006961 metal cation transporter (ZIP) 0.02 OrthoFinder output from all 47 species
Zm00001e030651_P002 ATZIP4, ZIP4,... metal cation transporter (ZIP) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
BP GO:0030001 metal ion transport IEA Interproscan
MF GO:0046873 metal ion transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004568 chitinase activity IEP HCCA
BP GO:0006022 aminoglycan metabolic process IEP HCCA
BP GO:0006026 aminoglycan catabolic process IEP HCCA
BP GO:0006030 chitin metabolic process IEP HCCA
BP GO:0006032 chitin catabolic process IEP HCCA
BP GO:0006040 amino sugar metabolic process IEP HCCA
MF GO:0008061 chitin binding IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
BP GO:0016998 cell wall macromolecule catabolic process IEP HCCA
BP GO:0044036 cell wall macromolecule metabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0046348 amino sugar catabolic process IEP HCCA
BP GO:1901071 glucosamine-containing compound metabolic process IEP HCCA
BP GO:1901072 glucosamine-containing compound catabolic process IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901136 carbohydrate derivative catabolic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR003689 ZIP 16 119
No external refs found!