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  5. Gb_38624

Gb_38624


Description : regulatory protein (CORD) of cortical microtubule organisation


Gene families : OG0001085 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001085_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_38624
Cluster HCCA: Cluster_51

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00077p00183470 evm_27.TU.AmTr_v1... No description available 0.11 OrthoFinder output from all 47 species
AT4G13370 No alias Plant protein of unknown function (DUF936) 0.13 OrthoFinder output from all 47 species
Ala_g32630 No alias regulatory protein *(CORD) of cortical microtubule... 0.04 OrthoFinder output from all 47 species
Als_g34014 No alias regulatory protein *(CORD) of cortical microtubule... 0.02 OrthoFinder output from all 47 species
Aop_g11292 No alias regulatory protein *(CORD) of cortical microtubule... 0.12 OrthoFinder output from all 47 species
Aspi01Gene00569.t1 Aspi01Gene00569 regulatory protein *(CORD) of cortical microtubule... 0.1 OrthoFinder output from all 47 species
Azfi_s0063.g035322 No alias regulatory protein *(CORD) of cortical microtubule... 0.02 OrthoFinder output from all 47 species
Azfi_s0077.g038058 No alias regulatory protein *(CORD) of cortical microtubule... 0.03 OrthoFinder output from all 47 species
Ceric.02G008100.1 Ceric.02G008100 regulatory protein *(CORD) of cortical microtubule... 0.23 OrthoFinder output from all 47 species
Ceric.11G037300.1 Ceric.11G037300 regulatory protein *(CORD) of cortical microtubule... 0.07 OrthoFinder output from all 47 species
Dcu_g07734 No alias regulatory protein *(CORD) of cortical microtubule... 0.03 OrthoFinder output from all 47 species
GSVIVT01015437001 No alias No description available 0.16 OrthoFinder output from all 47 species
LOC_Os11g02740.1 LOC_Os11g02740 regulatory protein (CORD) of cortical microtubule organisation 0.14 OrthoFinder output from all 47 species
LOC_Os12g02710.1 LOC_Os12g02710 regulatory protein (CORD) of cortical microtubule organisation 0.12 OrthoFinder output from all 47 species
Len_g03904 No alias regulatory protein *(CORD) of cortical microtubule... 0.08 OrthoFinder output from all 47 species
Lfl_g39733 No alias regulatory protein *(CORD) of cortical microtubule... 0.03 OrthoFinder output from all 47 species
MA_8827g0010 No alias regulatory protein (CORD) of cortical microtubule organisation 0.21 OrthoFinder output from all 47 species
Msp_g14571 No alias regulatory protein *(CORD) of cortical microtubule... 0.09 OrthoFinder output from all 47 species
Msp_g15670 No alias regulatory protein *(CORD) of cortical microtubule... 0.16 OrthoFinder output from all 47 species
Nbi_g10387 No alias regulatory protein *(CORD) of cortical microtubule... 0.18 OrthoFinder output from all 47 species
Ppi_g12415 No alias regulatory protein *(CORD) of cortical microtubule... 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0003.g001426 No alias regulatory protein *(CORD) of cortical microtubule... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0111.g020683 No alias regulatory protein *(CORD) of cortical microtubule... 0.06 OrthoFinder output from all 47 species
Solyc12g007020.2.1 Solyc12g007020 regulatory protein (CORD) of cortical microtubule organisation 0.14 OrthoFinder output from all 47 species
Spa_g12628 No alias regulatory protein *(CORD) of cortical microtubule... 0.04 OrthoFinder output from all 47 species
Spa_g44766 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Spa_g47771 No alias regulatory protein *(CORD) of cortical microtubule... 0.11 OrthoFinder output from all 47 species
Tin_g08819 No alias regulatory protein *(CORD) of cortical microtubule... 0.15 OrthoFinder output from all 47 species
Tin_g44365 No alias regulatory protein *(CORD) of cortical microtubule... 0.16 OrthoFinder output from all 47 species
Zm00001e024007_P001 Zm00001e024007 regulatory protein (CORD) of cortical microtubule organisation 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0003887 DNA-directed DNA polymerase activity IEP HCCA
MF GO:0003916 DNA topoisomerase activity IEP HCCA
MF GO:0003918 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006265 DNA topological change IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
CC GO:0018995 host cellular component IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
CC GO:0033643 host cell part IEP HCCA
CC GO:0033646 host intracellular part IEP HCCA
CC GO:0033647 host intracellular organelle IEP HCCA
CC GO:0033648 host intracellular membrane-bounded organelle IEP HCCA
MF GO:0034061 DNA polymerase activity IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
CC GO:0042025 host cell nucleus IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR010341 DUF936_pln 4 856
No external refs found!