Gb_37236 (HSF4, HSFB1, AT-HSFB1, ATHSF4)

Aliases : HSF4, HSFB1, AT-HSFB1, ATHSF4

Description : transcription factor (HSF)

Gene families : OG0000093 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000093_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Gb_37236

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00069p00130920	HSFA1B, ATHSF3,...	RNA biosynthesis.transcriptional activation.HSF (heat...	0.03	OrthoFinder output from all 47 species
AT5G43840	HSFA6A, AT-HSFA6A	heat shock transcription factor A6A	0.03	OrthoFinder output from all 47 species
AT5G54070	AT-HSFA9, HSFA9	heat shock transcription factor A9	0.03	OrthoFinder output from all 47 species
Aob_g26655	HSFB4, SCZ, AT-HSFB4	HSF-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Aop_g07907	HSFA1B, ATHSF3,...	HSF-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Dac_g44843	HSFA1B, ATHSF3,...	transcriptional regulator *(HsfA1) & original description: none	0.03	OrthoFinder output from all 47 species
LOC_Os01g39020.1	HSFA2, ATHSFA2,...	transcription factor (HSF)	0.03	OrthoFinder output from all 47 species
LOC_Os02g13800.1	AT-HSFC1, HSFC1,...	transcription factor (HSF)	0.02	OrthoFinder output from all 47 species
MA_110587g0010	HSFB4, SCZ, AT-HSFB4	transcription factor (HSF)	0.03	OrthoFinder output from all 47 species
Solyc06g053950.3.1	AT-HSFA6B,...	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
Solyc06g053960.3.1	AT-HSFA6B,...	transcription factor (HSF)	0.04	OrthoFinder output from all 47 species
Spa_g07151	ATHSF1, HSF1,...	HSF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g04512	HSFB4, SCZ, AT-HSFB4	HSF-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
CC	GO:0018995	host cellular component	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
CC	GO:0033643	host cell part	None	Extended
CC	GO:0033646	host intracellular part	None	Extended
CC	GO:0033647	host intracellular organelle	None	Extended
CC	GO:0033648	host intracellular membrane-bounded organelle	None	Extended
CC	GO:0042025	host cell nucleus	IEA	Interproscan
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0009116	nucleoside metabolic process	IEP	HCCA
BP	GO:0055086	nucleobase-containing small molecule metabolic process	IEP	HCCA
BP	GO:1901135	carbohydrate derivative metabolic process	IEP	HCCA
BP	GO:1901657	glycosyl compound metabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000232	HSF_DNA-bd	26	115

External Links

No external refs found!

Gb_37236 (HSF4, HSFB1, AT-HSFB1, ATHSF4)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation