1. Home
  2. Species
  3. Ginkgo biloba
  4. Sequence
  5. Gb_36328

Gb_36328 (PLSP1)


Aliases : PLSP1

Description : plastidic signal peptidase (PLSP/TPP)


Gene families : OG0000723 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000723_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_36328

Target Alias Description ECC score Gene Family Method Actions
Aob_g01408 PLSP1 plastidic signal peptidase *(PLSP/TPP) & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene23931.t1 PLSP1, Aspi01Gene23931 plastidic signal peptidase *(PLSP/TPP) & original... 0.04 OrthoFinder output from all 47 species
Azfi_s0051.g031335 PLSP1 plastidic signal peptidase *(PLSP/TPP) & original... 0.04 OrthoFinder output from all 47 species
Cre07.g344350 PLSP1 Protein modification.peptide maturation.plastid.PLSP/TPP... 0.05 OrthoFinder output from all 47 species
Dde_g43765 PLSP1 plastidic signal peptidase *(PLSP/TPP) & original... 0.03 OrthoFinder output from all 47 species
LOC_Os02g16709.1 PLSP1, LOC_Os02g16709 plastidic signal peptidase (PLSP/TPP) 0.03 OrthoFinder output from all 47 species
Ore_g19818 PLSP1 plastidic signal peptidase *(PLSP/TPP) & original... 0.04 OrthoFinder output from all 47 species
Pir_g19089 PLSP1 plastidic signal peptidase *(PLSP/TPP) & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0020.g008016 PLSP1 plastidic signal peptidase *(PLSP/TPP) & original... 0.04 OrthoFinder output from all 47 species
Solyc12g007120.2.1 PLSP1, Solyc12g007120 plastidic signal peptidase (PLSP/TPP) 0.04 OrthoFinder output from all 47 species
Spa_g48994 PLSP1 plastidic signal peptidase *(PLSP/TPP) & original... 0.05 OrthoFinder output from all 47 species
Tin_g15463 PLSP1 plastidic signal peptidase *(PLSP/TPP) & original... 0.03 OrthoFinder output from all 47 species
Zm00001e014232_P002 PLSP1, Zm00001e014232 plastidic signal peptidase (PLSP/TPP) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0031072 heat shock protein binding IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR015927 Peptidase_S24_S26A/B/C 159 199
IPR019533 Peptidase_S26 231 265
No external refs found!