Gb_35116 (AtHB23, HB23)

Aliases : AtHB23, HB23

Description : transcription factor (HD-ZIP I/II)

Gene families : OG0000129 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000129_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Gb_35116
Cluster	HCCA: Cluster_137

Target	Alias	Description	ECC score	Gene Family Method
AT2G22430	HB6, ATHB6	homeobox protein 6	0.04	OrthoFinder output from all 47 species
AT3G61890	HB-12, ATHB-12, ATHB12	homeobox 12	0.03	OrthoFinder output from all 47 species
Aev_g20439	ATHB13	HD-ZIP I/II-type transcription factor & original...	0.03	OrthoFinder output from all 47 species
Als_g03703	ATHB16, HB16, ATHB-16	regulatory protein *(LMI1) of floral meristem identity...	0.03	OrthoFinder output from all 47 species
Als_g28925	ATHB40, HB40, HB-5	HD-ZIP I/II-type transcription factor & original...	0.02	OrthoFinder output from all 47 species
Cba_g08070	ATHB3, HB-3, ATHB-3, HAT7	HD-ZIP I/II-type transcription factor & original...	0.03	OrthoFinder output from all 47 species
Dac_g21371	ATHB21, HB21, HB-2	HD-ZIP I/II-type transcription factor & original...	0.02	OrthoFinder output from all 47 species
GSVIVT01019655001	HB-7, ATHB-7, ATHB7	RNA biosynthesis.transcriptional activation.HB...	0.05	OrthoFinder output from all 47 species
GSVIVT01020078001	ATHB1, ATHB-1,...	RNA biosynthesis.transcriptional activation.HB...	0.03	OrthoFinder output from all 47 species
GSVIVT01032491001	ATHB1, ATHB-1,...	RNA biosynthesis.transcriptional activation.HB...	0.05	OrthoFinder output from all 47 species
Gb_04698	ATHB3, HB-3, ATHB-3, HAT7	transcription factor (HD-ZIP I/II)	0.05	OrthoFinder output from all 47 species
LOC_Os02g43330.1	HB-7, ATHB-7,...	transcription factor (HD-ZIP I/II)	0.02	OrthoFinder output from all 47 species
LOC_Os03g08960.1	ATHB5, ATHB-5,...	transcription factor (HD-ZIP I/II)	0.03	OrthoFinder output from all 47 species
LOC_Os03g10210.1	ATHB40, HB40,...	transcription factor (HD-ZIP I/II)	0.03	OrthoFinder output from all 47 species
LOC_Os04g45810.1	HB-7, ATHB-7,...	transcription factor (HD-ZIP I/II)	0.02	OrthoFinder output from all 47 species
Len_g29447	ATHB5, ATHB-5, HB5	HD-ZIP I/II-type transcription factor & original...	0.04	OrthoFinder output from all 47 species
Len_g31446	ATHB5, ATHB-5, HB5	HD-ZIP I/II-type transcription factor & original...	0.05	OrthoFinder output from all 47 species
Lfl_g23117	ATHB13	HD-ZIP I/II-type transcription factor & original...	0.05	OrthoFinder output from all 47 species
MA_9241385g0010	ATHB13	transcription factor (HD-ZIP I/II)	0.03	OrthoFinder output from all 47 species
Ore_g40431	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Pnu_g06112	ATHB13	HD-ZIP I/II-type transcription factor & original...	0.03	OrthoFinder output from all 47 species
Pnu_g07961	ATHB16, HB16, ATHB-16	regulatory protein *(LMI1) of floral meristem identity...	0.03	OrthoFinder output from all 47 species
Pnu_g32938	HB51, ATHB51, LMI1	HD-ZIP I/II-type transcription factor & original...	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0138.g022579	ATHB21, HB21, HB-2	HD-ZIP I/II-type transcription factor & original...	0.03	OrthoFinder output from all 47 species
Solyc02g085630.3.1	ATHB40, HB40,...	transcription factor (HD-ZIP I/II)	0.04	OrthoFinder output from all 47 species
Solyc03g082550.3.1	HB-7, ATHB-7,...	transcription factor (HD-ZIP I/II)	0.04	OrthoFinder output from all 47 species
Solyc05g006980.3.1	ATHB1, ATHB-1,...	transcription factor (HD-ZIP I/II)	0.04	OrthoFinder output from all 47 species
Solyc06g053220.3.1	HB-7, ATHB-7,...	transcription factor (HD-ZIP I/II)	0.03	OrthoFinder output from all 47 species
Solyc07g062790.1.1	ATHB52, HB52,...	transcription factor (HD-ZIP I/II)	0.06	OrthoFinder output from all 47 species
Spa_g02959	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g09467	ATHB1, ATHB-1,...	HD-ZIP I/II-type transcription factor & original...	0.04	OrthoFinder output from all 47 species
Zm00001e007381_P001	HB-7, ATHB-7,...	transcription factor (HD-ZIP I/II)	0.03	OrthoFinder output from all 47 species
Zm00001e009770_P001	ATHB1, ATHB-1,...	transcription factor (HD-ZIP I/II)	0.03	OrthoFinder output from all 47 species
Zm00001e010218_P001	HB-7, ATHB-7,...	transcription factor (HD-ZIP I/II)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEP	HCCA
BP	GO:0006811	monoatomic ion transport	IEP	HCCA
BP	GO:0006812	monoatomic cation transport	IEP	HCCA
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	IEP	HCCA
BP	GO:0030001	metal ion transport	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003106	Leu_zip_homeo	128	166
IPR001356	Homeobox_dom	74	126

External Links

No external refs found!

Gb_35116 (AtHB23, HB23)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation