Gb_35107


Description : Histone-lysine N-methyltransferase ATX1 OS=Arabidopsis thaliana (sp|q9c5x4|atx1_arath : 133.0)


Gene families : OG0002734 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002734_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_35107

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00173p00060580 evm_27.TU.AmTr_v1... Histone-lysine N-methyltransferase ATX1 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Adi_g019450 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g14225 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g29424 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g69981 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.29G080500.1 Ceric.29G080500 not classified & original description: pacid=50624681... 0.04 OrthoFinder output from all 47 species
GSVIVT01008944001 No alias Histone-lysine N-methyltransferase ATX1 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
LOC_Os02g52960.1 LOC_Os02g52960 Histone-lysine N-methyltransferase ATX1 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
LOC_Os06g10690.1 LOC_Os06g10690 Histone-lysine N-methyltransferase ATX1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Len_g29830 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10435451g0030 No alias Histone-lysine N-methyltransferase ATX1 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0138.g022590 No alias not classified & original description: CDS=632-4768 0.02 OrthoFinder output from all 47 species
Sam_g14038 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g06993 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g22217 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g37190 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!