Aliases : THO2, AtTHO2
Description : component THOC2/Tho2 of mRNP trafficking THO subcomplex
Gene families : OG0003635 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003635_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Gb_33812 | |
Cluster | HCCA: Cluster_41 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00138p00044110 | THO2, AtTHO2,... | RNA processing.messenger ribonucleoprotein particle... | 0.07 | OrthoFinder output from all 47 species | |
AT1G24706 | THO2, AtTHO2 | THO2 | 0.07 | OrthoFinder output from all 47 species | |
Adi_g107430 | THO2, AtTHO2 | component *(THOC2/Tho2) of mRNP trafficking THO... | 0.06 | OrthoFinder output from all 47 species | |
Aev_g08657 | THO2, AtTHO2 | component *(THOC2/Tho2) of mRNP trafficking THO... | 0.07 | OrthoFinder output from all 47 species | |
Ala_g38322 | THO2, AtTHO2 | component *(THOC2/Tho2) of mRNP trafficking THO... | 0.06 | OrthoFinder output from all 47 species | |
Als_g01214 | THO2, AtTHO2 | component *(THOC2/Tho2) of mRNP trafficking THO... | 0.04 | OrthoFinder output from all 47 species | |
Aspi01Gene09828.t1 | THO2, AtTHO2,... | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Azfi_s0362.g066911 | THO2, AtTHO2 | component *(THOC2/Tho2) of mRNP trafficking THO... | 0.03 | OrthoFinder output from all 47 species | |
Ceric.19G073400.1 | THO2, AtTHO2,... | component *(THOC2/Tho2) of mRNP trafficking THO... | 0.07 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00001428.15 | THO2, AtTHO2 | RNA processing.messenger ribonucleoprotein particle... | 0.04 | OrthoFinder output from all 47 species | |
Cre12.g507700 | THO2, AtTHO2 | RNA processing.messenger ribonucleoprotein particle... | 0.02 | OrthoFinder output from all 47 species | |
Dac_g15531 | THO2, AtTHO2 | component *(THOC2/Tho2) of mRNP trafficking THO... | 0.04 | OrthoFinder output from all 47 species | |
Dcu_g02056 | THO2, AtTHO2 | component *(THOC2/Tho2) of mRNP trafficking THO... | 0.1 | OrthoFinder output from all 47 species | |
Dde_g04015 | THO2, AtTHO2 | component *(THOC2/Tho2) of mRNP trafficking THO... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01011619001 | THO2, AtTHO2 | RNA processing.messenger ribonucleoprotein particle... | 0.07 | OrthoFinder output from all 47 species | |
LOC_Os01g68810.1 | THO2, AtTHO2,... | component THOC2/Tho2 of mRNP trafficking THO subcomplex | 0.02 | OrthoFinder output from all 47 species | |
Len_g01408 | THO2, AtTHO2 | component *(THOC2/Tho2) of mRNP trafficking THO... | 0.07 | OrthoFinder output from all 47 species | |
Lfl_g04297 | THO2, AtTHO2 | component *(THOC2/Tho2) of mRNP trafficking THO... | 0.03 | OrthoFinder output from all 47 species | |
MA_10184563g0010 | THO2, AtTHO2 | component THOC2/Tho2 of mRNP trafficking THO subcomplex | 0.02 | OrthoFinder output from all 47 species | |
MA_10430572g0010 | THO2, AtTHO2 | component THOC2/Tho2 of mRNP trafficking THO subcomplex | 0.07 | OrthoFinder output from all 47 species | |
Mp1g20320.1 | THO2, AtTHO2 | component THOC2/Tho2 of mRNP trafficking THO subcomplex | 0.09 | OrthoFinder output from all 47 species | |
Msp_g02102 | THO2, AtTHO2 | component *(THOC2/Tho2) of mRNP trafficking THO... | 0.03 | OrthoFinder output from all 47 species | |
Ore_g16129 | THO2, AtTHO2 | component *(THOC2/Tho2) of mRNP trafficking THO... | 0.11 | OrthoFinder output from all 47 species | |
Pir_g17399 | THO2, AtTHO2 | component *(THOC2/Tho2) of mRNP trafficking THO... | 0.05 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0104.g020047 | THO2, AtTHO2 | component *(THOC2/Tho2) of mRNP trafficking THO... | 0.04 | OrthoFinder output from all 47 species | |
Sam_g51475 | No alias | component *(THOC2/Tho2) of mRNP trafficking THO... | 0.02 | OrthoFinder output from all 47 species | |
Smo173562 | THO2, AtTHO2 | RNA processing.messenger ribonucleoprotein particle... | 0.07 | OrthoFinder output from all 47 species | |
Solyc05g017890.4.1 | THO2, AtTHO2,... | component THOC2/Tho2 of mRNP trafficking THO subcomplex | 0.1 | OrthoFinder output from all 47 species | |
Spa_g18725 | THO2, AtTHO2 | component *(THOC2/Tho2) of mRNP trafficking THO... | 0.05 | OrthoFinder output from all 47 species | |
Tin_g08678 | THO2, AtTHO2 | component *(THOC2/Tho2) of mRNP trafficking THO... | 0.05 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEP | HCCA |
MF | GO:0004386 | helicase activity | IEP | HCCA |
MF | GO:0005488 | binding | IEP | HCCA |
BP | GO:0006351 | DNA-templated transcription | IEP | HCCA |
BP | GO:0006366 | transcription by RNA polymerase II | IEP | HCCA |
BP | GO:0006397 | mRNA processing | IEP | HCCA |
BP | GO:0006606 | protein import into nucleus | IEP | HCCA |
BP | GO:0006913 | nucleocytoplasmic transport | IEP | HCCA |
BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
BP | GO:0016071 | mRNA metabolic process | IEP | HCCA |
BP | GO:0033365 | protein localization to organelle | IEP | HCCA |
MF | GO:0034062 | 5'-3' RNA polymerase activity | IEP | HCCA |
BP | GO:0034504 | protein localization to nucleus | IEP | HCCA |
BP | GO:0051169 | nuclear transport | IEP | HCCA |
BP | GO:0051170 | import into nucleus | IEP | HCCA |
BP | GO:0072594 | establishment of protein localization to organelle | IEP | HCCA |
MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
BP | GO:0097659 | nucleic acid-templated transcription | IEP | HCCA |
MF | GO:0097747 | RNA polymerase activity | IEP | HCCA |
MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
No external refs found! |