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  5. Gb_33268

Gb_33268


Description : effector receptor (NLR)


Gene families : OG0000030 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_33268
Cluster HCCA: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00250200 evm_27.TU.AmTr_v1... Disease resistance protein TAO1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00010p00250450 evm_27.TU.AmTr_v1... External stimuli response.biotic stress.pathogen... 0.02 OrthoFinder output from all 47 species
AMTR_s00024p00233110 evm_27.TU.AmTr_v1... External stimuli response.biotic stress.pathogen... 0.02 OrthoFinder output from all 47 species
AMTR_s00056p00215980 evm_27.TU.AmTr_v1... Protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1... 0.03 OrthoFinder output from all 47 species
AT1G17600 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.03 OrthoFinder output from all 47 species
AT1G17610 No alias Disease resistance protein (TIR-NBS class) 0.04 OrthoFinder output from all 47 species
AT1G17615 No alias Disease resistance protein (TIR-NBS class) 0.03 OrthoFinder output from all 47 species
AT1G31540 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.07 OrthoFinder output from all 47 species
AT1G56510 WRR4, ADR2 Disease resistance protein (TIR-NBS-LRR class) 0.05 OrthoFinder output from all 47 species
AT1G57630 No alias Toll-Interleukin-Resistance (TIR) domain family protein 0.03 OrthoFinder output from all 47 species
AT1G57650 No alias ATP binding 0.03 OrthoFinder output from all 47 species
AT1G63880 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.03 OrthoFinder output from all 47 species
AT1G69550 No alias disease resistance protein (TIR-NBS-LRR class) 0.03 OrthoFinder output from all 47 species
AT1G72890 No alias Disease resistance protein (TIR-NBS class) 0.03 OrthoFinder output from all 47 species
AT1G72910 No alias Toll-Interleukin-Resistance (TIR) domain-containing protein 0.03 OrthoFinder output from all 47 species
AT1G72930 TIR toll/interleukin-1 receptor-like 0.03 OrthoFinder output from all 47 species
AT2G14080 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.04 OrthoFinder output from all 47 species
AT2G16870 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.06 OrthoFinder output from all 47 species
AT2G20142 No alias Toll-Interleukin-Resistance (TIR) domain family protein 0.03 OrthoFinder output from all 47 species
AT3G04220 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.03 OrthoFinder output from all 47 species
AT3G25510 No alias disease resistance protein (TIR-NBS-LRR class), putative 0.03 OrthoFinder output from all 47 species
AT3G44630 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.04 OrthoFinder output from all 47 species
AT4G11170 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.03 OrthoFinder output from all 47 species
AT4G16890 SNC1, BAL disease resistance protein (TIR-NBS-LRR class), putative 0.03 OrthoFinder output from all 47 species
AT5G18360 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.05 OrthoFinder output from all 47 species
AT5G22690 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.04 OrthoFinder output from all 47 species
AT5G38850 No alias Disease resistance protein (TIR-NBS-LRR class) 0.03 OrthoFinder output from all 47 species
AT5G40910 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.04 OrthoFinder output from all 47 species
AT5G41740 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.03 OrthoFinder output from all 47 species
AT5G41750 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.05 OrthoFinder output from all 47 species
AT5G46260 No alias disease resistance protein (TIR-NBS-LRR class) family 0.05 OrthoFinder output from all 47 species
AT5G46470 RPS6 disease resistance protein (TIR-NBS-LRR class) family 0.05 OrthoFinder output from all 47 species
AT5G46490 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.04 OrthoFinder output from all 47 species
AT5G46500 No alias BEST Arabidopsis thaliana protein match is: disease... 0.09 OrthoFinder output from all 47 species
AT5G46520 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.06 OrthoFinder output from all 47 species
AT5G58120 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.08 OrthoFinder output from all 47 species
Aev_g14789 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g09238 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ala_g17168 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g28422 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g32513 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g32514 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g36066 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g36971 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g32850 LAZ5 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g42673 CSA1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene45485.t1 Aspi01Gene45485 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.11G099400.1 Ceric.11G099400 not classified & original description: pacid=50595890... 0.04 OrthoFinder output from all 47 species
Ceric.16G018600.1 Ceric.16G018600 not classified & original description: pacid=50589942... 0.02 OrthoFinder output from all 47 species
Dcu_g41821 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g38640 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g12436 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01020123001 No alias External stimuli response.biotic stress.pathogen... 0.04 OrthoFinder output from all 47 species
GSVIVT01022984001 No alias External stimuli response.biotic stress.pathogen... 0.04 OrthoFinder output from all 47 species
GSVIVT01023025001 No alias TMV resistance protein N OS=Nicotiana glutinosa 0.04 OrthoFinder output from all 47 species
GSVIVT01025907001 TAO1 External stimuli response.biotic stress.pathogen... 0.03 OrthoFinder output from all 47 species
GSVIVT01026003001 No alias External stimuli response.biotic stress.pathogen... 0.08 OrthoFinder output from all 47 species
GSVIVT01036304001 No alias External stimuli response.biotic stress.pathogen... 0.02 OrthoFinder output from all 47 species
GSVIVT01036400001 No alias External stimuli response.biotic stress.pathogen... 0.04 OrthoFinder output from all 47 species
GSVIVT01038755001 No alias TMV resistance protein N OS=Nicotiana glutinosa 0.03 OrthoFinder output from all 47 species
Gb_04201 No alias effector receptor (NLR) 0.04 OrthoFinder output from all 47 species
Gb_05909 No alias TMV resistance protein N OS=Nicotiana glutinosa... 0.06 OrthoFinder output from all 47 species
Gb_11158 No alias effector receptor (NLR) 0.04 OrthoFinder output from all 47 species
Gb_11356 No alias effector receptor (NLR) 0.03 OrthoFinder output from all 47 species
Gb_12319 No alias effector receptor (NLR) 0.04 OrthoFinder output from all 47 species
Gb_17905 No alias TMV resistance protein N OS=Nicotiana glutinosa... 0.04 OrthoFinder output from all 47 species
Gb_20301 No alias TMV resistance protein N OS=Nicotiana glutinosa... 0.02 OrthoFinder output from all 47 species
Gb_26048 No alias effector receptor (NLR) 0.02 OrthoFinder output from all 47 species
Gb_27866 No alias effector receptor (NLR) 0.04 OrthoFinder output from all 47 species
Gb_29339 No alias effector receptor (NLR) 0.04 OrthoFinder output from all 47 species
MA_10137384g0010 No alias effector receptor (NLR) 0.03 OrthoFinder output from all 47 species
MA_10189965g0010 No alias effector receptor (NLR) 0.05 OrthoFinder output from all 47 species
MA_10427224g0010 No alias TMV resistance protein N OS=Nicotiana glutinosa... 0.04 OrthoFinder output from all 47 species
MA_10428235g0010 No alias Disease resistance protein TAO1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_10430523g0010 No alias TMV resistance protein N OS=Nicotiana glutinosa... 0.03 OrthoFinder output from all 47 species
MA_10431676g0030 No alias Disease resistance-like protein DSC1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
MA_10431791g0010 No alias Disease resistance protein TAO1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_10432285g0020 No alias Disease resistance protein RRS1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_10436141g0010 No alias TMV resistance protein N OS=Nicotiana glutinosa... 0.04 OrthoFinder output from all 47 species
MA_10436946g0010 No alias effector receptor (NLR) 0.04 OrthoFinder output from all 47 species
MA_106517g0010 No alias TMV resistance protein N OS=Nicotiana glutinosa... 0.03 OrthoFinder output from all 47 species
MA_119453g0010 No alias TMV resistance protein N OS=Nicotiana glutinosa... 0.03 OrthoFinder output from all 47 species
MA_129800g0010 No alias TMV resistance protein N OS=Nicotiana glutinosa... 0.05 OrthoFinder output from all 47 species
MA_20580g0030 No alias TMV resistance protein N OS=Nicotiana glutinosa... 0.04 OrthoFinder output from all 47 species
MA_20580g0040 No alias effector receptor (NLR) 0.04 OrthoFinder output from all 47 species
MA_263716g0010 No alias TMV resistance protein N OS=Nicotiana glutinosa... 0.03 OrthoFinder output from all 47 species
MA_30664g0020 No alias effector receptor (NLR) 0.03 OrthoFinder output from all 47 species
MA_390667g0010 No alias effector receptor (NLR) 0.03 OrthoFinder output from all 47 species
MA_4175g0020 No alias TMV resistance protein N OS=Nicotiana glutinosa... 0.03 OrthoFinder output from all 47 species
MA_43503g0010 No alias effector receptor (NLR) 0.03 OrthoFinder output from all 47 species
MA_450622g0010 No alias effector receptor (NLR) 0.05 OrthoFinder output from all 47 species
MA_5433154g0010 No alias effector receptor (NLR) 0.05 OrthoFinder output from all 47 species
MA_5812134g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_612059g0010 No alias effector receptor (NLR) 0.03 OrthoFinder output from all 47 species
MA_61439g0020 No alias TMV resistance protein N OS=Nicotiana glutinosa... 0.03 OrthoFinder output from all 47 species
MA_6891298g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_8647159g0010 No alias TMV resistance protein N OS=Nicotiana glutinosa... 0.03 OrthoFinder output from all 47 species
MA_8920553g0010 No alias effector receptor (NLR) 0.02 OrthoFinder output from all 47 species
MA_894630g0010 No alias effector receptor (NLR) 0.03 OrthoFinder output from all 47 species
MA_945093g0020 LAZ5 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_9873718g0020 No alias effector receptor (NLR) 0.03 OrthoFinder output from all 47 species
Pir_g42611 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g45853 No alias effector receptor *(NLR) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g48670 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc01g014840.3.1 Solyc01g014840 effector receptor (NLR) 0.03 OrthoFinder output from all 47 species
Solyc01g102840.3.1 Solyc01g102840 effector receptor (NLR) 0.05 OrthoFinder output from all 47 species
Solyc01g102850.3.1 Solyc01g102850 effector receptor (NLR) 0.04 OrthoFinder output from all 47 species
Solyc04g007320.3.1 Solyc04g007320 effector receptor (NLR) 0.06 OrthoFinder output from all 47 species
Solyc11g011350.3.1 Solyc11g011350 effector receptor (NLR) 0.04 OrthoFinder output from all 47 species
Solyc12g096880.3.1 Solyc12g096880 effector receptor (NLR) 0.03 OrthoFinder output from all 47 species
Solyc12g097000.2.1 Solyc12g097000 effector receptor (NLR) 0.06 OrthoFinder output from all 47 species
Spa_g51896 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
BP GO:0007165 signal transduction IEA Interproscan
MF GO:0043531 ADP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002182 NB-ARC 227 460
IPR000157 TIR_dom 19 188
No external refs found!