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  5. Gb_32562

Gb_32562 (PTAC4, VIPP1)


Aliases : PTAC4, VIPP1

Description : VIPP protein involved in plastid membrane fusion


Gene families : OG0002497 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002497_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_32562

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00066p00198600 PTAC4, VIPP1,... Photosynthesis.photophosphorylation.photosystem... 0.05 OrthoFinder output from all 47 species
AT1G65260 PTAC4, VIPP1 plastid transcriptionally active 4 0.08 OrthoFinder output from all 47 species
Adi_g019901 PTAC4, VIPP1 protein involved in plastid membrane fusion *(VIPP) &... 0.03 OrthoFinder output from all 47 species
Aob_g05137 PTAC4, VIPP1 protein involved in plastid membrane fusion *(VIPP) &... 0.03 OrthoFinder output from all 47 species
Aop_g01641 PTAC4, VIPP1 protein involved in plastid membrane fusion *(VIPP) &... 0.04 OrthoFinder output from all 47 species
Azfi_s0064.g035535 PTAC4, VIPP1 protein involved in plastid membrane fusion *(VIPP) &... 0.04 OrthoFinder output from all 47 species
Ceric.21G054600.1 PTAC4, VIPP1,... protein involved in plastid membrane fusion *(VIPP) &... 0.04 OrthoFinder output from all 47 species
Dac_g07394 PTAC4, VIPP1 protein involved in plastid membrane fusion *(VIPP) &... 0.04 OrthoFinder output from all 47 species
Dcu_g15380 PTAC4, VIPP1 protein involved in plastid membrane fusion *(VIPP) &... 0.03 OrthoFinder output from all 47 species
Ehy_g07429 PTAC4, VIPP1 protein involved in plastid membrane fusion *(VIPP) &... 0.06 OrthoFinder output from all 47 species
GSVIVT01019065001 PTAC4, VIPP1 Photosynthesis.photophosphorylation.photosystem... 0.05 OrthoFinder output from all 47 species
LOC_Os01g67000.1 PTAC4, VIPP1,... VIPP protein involved in plastid membrane fusion 0.05 OrthoFinder output from all 47 species
Len_g11598 PTAC4, VIPP1 protein involved in plastid membrane fusion *(VIPP) &... 0.03 OrthoFinder output from all 47 species
Lfl_g38402 PTAC4, VIPP1 protein involved in plastid membrane fusion *(VIPP) &... 0.04 OrthoFinder output from all 47 species
MA_503650g0010 PTAC4, VIPP1 VIPP protein involved in plastid membrane fusion 0.03 OrthoFinder output from all 47 species
MA_572791g0010 PTAC4, VIPP1 Membrane-associated protein VIPP1, chloroplastic... 0.03 OrthoFinder output from all 47 species
Mp5g20680.1 PTAC4, VIPP1 VIPP protein involved in plastid membrane fusion 0.04 OrthoFinder output from all 47 species
Msp_g08193 PTAC4, VIPP1 protein involved in plastid membrane fusion *(VIPP) &... 0.03 OrthoFinder output from all 47 species
Msp_g20762 PTAC4, VIPP1 protein involved in plastid membrane fusion *(VIPP) &... 0.04 OrthoFinder output from all 47 species
Nbi_g07063 PTAC4, VIPP1 protein involved in plastid membrane fusion *(VIPP) &... 0.02 OrthoFinder output from all 47 species
Ore_g16052 PTAC4, VIPP1 protein involved in plastid membrane fusion *(VIPP) &... 0.02 OrthoFinder output from all 47 species
Ppi_g10062 PTAC4, VIPP1 protein involved in plastid membrane fusion *(VIPP) &... 0.06 OrthoFinder output from all 47 species
Sam_g07518 No alias protein involved in plastid membrane fusion *(VIPP) &... 0.03 OrthoFinder output from all 47 species
Solyc11g008990.2.1 PTAC4, VIPP1,... VIPP protein involved in plastid membrane fusion 0.04 OrthoFinder output from all 47 species
Spa_g11958 PTAC4, VIPP1 protein involved in plastid membrane fusion *(VIPP) &... 0.04 OrthoFinder output from all 47 species
Tin_g13395 PTAC4, VIPP1 protein involved in plastid membrane fusion *(VIPP) &... 0.05 OrthoFinder output from all 47 species
Zm00001e018980_P001 PTAC4, VIPP1,... VIPP protein involved in plastid membrane fusion 0.05 OrthoFinder output from all 47 species
Zm00001e028569_P001 PTAC4, VIPP1,... VIPP protein involved in plastid membrane fusion 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003747 translation release factor activity IEP HCCA
MF GO:0004784 superoxide dismutase activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005261 monoatomic cation channel activity IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006415 translational termination IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0006754 ATP biosynthetic process IEP HCCA
BP GO:0006801 superoxide metabolic process IEP HCCA
MF GO:0008079 translation termination factor activity IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009152 purine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
BP GO:0009260 ribonucleotide biosynthetic process IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
MF GO:0009982 pseudouridine synthase activity IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015252 proton channel activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
BP GO:0015986 proton motive force-driven ATP synthesis IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016721 oxidoreductase activity, acting on superoxide radicals as acceptor IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
BP GO:0022411 cellular component disassembly IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0032984 protein-containing complex disassembly IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046390 ribose phosphate biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
BP GO:0072593 reactive oxygen species metabolic process IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR007157 PspA_IM30 94 310
No external refs found!