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  5. Gb_30335

Gb_30335


Description : Cytochrome c oxidase subunit 3 OS=Aegilops columnaris (sp|q36952|cox3_aegco : 322.0)


Gene families : OG0004952 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004952_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_30335
Cluster HCCA: Cluster_22

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00130p00119570 evm_27.TU.AmTr_v1... Cytochrome c oxidase subunit 3 OS=Oenothera berteroana 0.04 OrthoFinder output from all 47 species
AT2G07687 No alias Cytochrome c oxidase, subunit III 0.07 OrthoFinder output from all 47 species
ATMG00730 COX3 cytochrome c oxidase subunit 3 0.08 OrthoFinder output from all 47 species
Aev_g12777 No alias component *(COX3) of cytochrome c oxidase complex &... 0.03 OrthoFinder output from all 47 species
Ceric.01G075700.1 Ceric.01G075700 not classified & original description: pacid=50591411... 0.05 OrthoFinder output from all 47 species
Ceric.17G026400.1 Ceric.17G026400 not classified & original description: pacid=50618566... 0.07 OrthoFinder output from all 47 species
Ceric.25G023200.1 Ceric.25G023200 not classified & original description: pacid=50593624... 0.04 OrthoFinder output from all 47 species
Ceric.32G055800.1 Ceric.32G055800 not classified & original description: pacid=50598756... 0.06 OrthoFinder output from all 47 species
Cre04.g221700 No alias Cytochrome c oxidase subunit 3 OS=Prototheca wickerhamii 0.03 OrthoFinder output from all 47 species
Gb_02258 No alias membrane-anchor component SDH4 of succinate dehydrogenase complex 0.06 OrthoFinder output from all 47 species
Len_g02696 No alias component *(COX3) of cytochrome c oxidase complex &... 0.04 OrthoFinder output from all 47 species
MA_10429360g0030 No alias Cytochrome c oxidase subunit 3 OS=Helianthus annuus... 0.03 OrthoFinder output from all 47 species
Nbi_g14648 No alias component *(COX3) of cytochrome c oxidase complex &... 0.09 OrthoFinder output from all 47 species
Sam_g03259 No alias component *(COX3) of cytochrome c oxidase complex &... 0.09 OrthoFinder output from all 47 species
Solyc00g500303.1.1 Solyc00g500303 component COX3 of cytochrome c oxidase complex 0.07 OrthoFinder output from all 47 species
Zm00001e037217_P001 Zm00001e037217 component COX3 of cytochrome c oxidase complex 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0015002 obsolete heme-copper terminal oxidase activity IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0006754 ATP biosynthetic process IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009152 purine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
BP GO:0009260 ribonucleotide biosynthetic process IEP HCCA
BP GO:0015986 proton motive force-driven ATP synthesis IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046390 ribose phosphate biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
BP GO:1902600 proton transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR000298 Cyt_c_oxidase-like_su3 7 219
No external refs found!