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  5. Gb_28061

Gb_28061


Description : catalytic component CDKG of cyclin-dependent kinase complex. protein kinase (CDKG)


Gene families : OG0002520 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002520_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_28061
Cluster HCCA: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00090240 evm_27.TU.AmTr_v1... Protein modification.phosphorylation.CMGC kinase... 0.03 OrthoFinder output from all 47 species
AT1G67580 No alias Protein kinase superfamily protein 0.04 OrthoFinder output from all 47 species
Ceric.32G016400.1 Ceric.32G016400 EC_2.7 transferase transferring phosphorus-containing... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001003.23 No alias Cyclin-dependent kinase G-2 OS=Oryza sativa subsp. japonica 0.04 OrthoFinder output from all 47 species
GSVIVT01010338001 No alias Protein modification.phosphorylation.CMGC kinase... 0.03 OrthoFinder output from all 47 species
LOC_Os04g41100.4 LOC_Os04g41100 catalytic component CDKG of cyclin-dependent kinase... 0.03 OrthoFinder output from all 47 species
Lfl_g03372 No alias EC_2.7 transferase transferring phosphorus-containing... 0.03 OrthoFinder output from all 47 species
Zm00001e007742_P001 Zm00001e007742 catalytic component CDKG of cyclin-dependent kinase... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0006468 protein phosphorylation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003729 mRNA binding IEP HCCA
CC GO:0005685 U1 snRNP IEP HCCA
BP GO:0006376 mRNA splice site selection IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0022618 ribonucleoprotein complex assembly IEP HCCA
CC GO:0030532 small nuclear ribonucleoprotein complex IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0071826 ribonucleoprotein complex subunit organization IEP HCCA
CC GO:0097525 spliceosomal snRNP complex IEP HCCA
CC GO:0120114 Sm-like protein family complex IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR000719 Prot_kinase_dom 425 715
No external refs found!