Gb_27456


Description : no hits & (original description: none)


Gene families : OG0002638 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002638_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_27456
Cluster HCCA: Cluster_70

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00005p00099640 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00022p00224500 evm_27.TU.AmTr_v1... No description available 0.06 OrthoFinder output from all 47 species
AMTR_s00069p00110230 evm_27.TU.AmTr_v1... Protein MEN-8 OS=Silene latifolia 0.06 OrthoFinder output from all 47 species
AT5G07230 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.05 OrthoFinder output from all 47 species
AT5G48485 DIR1 Bifunctional inhibitor/lipid-transfer protein/seed... 0.02 OrthoFinder output from all 47 species
AT5G55410 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.03 OrthoFinder output from all 47 species
Aop_g14820 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g24129 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.07G064700.1 Ceric.07G064700 not classified & original description: pacid=50625967... 0.03 OrthoFinder output from all 47 species
Dac_g17529 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g18333 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g20054 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g31934 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g39418 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
GSVIVT01031677001 No alias No description available 0.06 OrthoFinder output from all 47 species
Gb_27177 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os01g68580.1 LOC_Os01g68580 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os01g68589.1 LOC_Os01g68589 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os07g18750.1 LOC_Os07g18750 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g41120 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g28328 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Msp_g29474 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g14335 No alias type-III lipid transfer protein *(LTP-III) & original... 0.04 OrthoFinder output from all 47 species
Nbi_g24604 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g40103 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g40422 No alias type-III lipid transfer protein *(LTP-III) & original... 0.04 OrthoFinder output from all 47 species
Ore_g40423 No alias type-III lipid transfer protein *(LTP-III) & original... 0.02 OrthoFinder output from all 47 species
Ppi_g08075 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g17769 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g18327 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g009590.3.1 Solyc01g009590 Protein 108 OS=Solanum lycopersicum (sp|q43495|108_sollc : 89.4) 0.04 OrthoFinder output from all 47 species
Solyc01g086830.4.1 Solyc01g086830 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Solyc03g026115.1.1 Solyc03g026115 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Solyc06g035820.1.1 Solyc06g035820 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Spa_g40221 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g27800 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e028498_P001 Zm00001e028498 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e028499_P001 Zm00001e028499 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0006643 membrane lipid metabolic process IEP HCCA
BP GO:0006644 phospholipid metabolic process IEP HCCA
BP GO:0006664 glycolipid metabolic process IEP HCCA
BP GO:0008654 phospholipid biosynthetic process IEP HCCA
MF GO:0008759 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity IEP HCCA
BP GO:0009245 lipid A biosynthetic process IEP HCCA
BP GO:0009247 glycolipid biosynthetic process IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
BP GO:0009312 oligosaccharide biosynthetic process IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP HCCA
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP HCCA
MF GO:0019213 deacetylase activity IEP HCCA
BP GO:0046467 membrane lipid biosynthetic process IEP HCCA
BP GO:0046493 lipid A metabolic process IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1901269 lipooligosaccharide metabolic process IEP HCCA
BP GO:1901271 lipooligosaccharide biosynthetic process IEP HCCA
BP GO:1903509 liposaccharide metabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!