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  5. Gb_27100

Gb_27100 (ATSYP124, SYP124)


Aliases : ATSYP124, SYP124

Description : Qa-SNARE component KNOLLE of SNARE cell-plate vesicle fusion complex. SYP1-group Qa-type SNARE component


Gene families : OG0000392 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000392_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_27100
Cluster HCCA: Cluster_130

Target Alias Description ECC score Gene Family Method Actions
AT3G11820 SYP121,... syntaxin of plants 121 0.03 OrthoFinder output from all 47 species
AT3G52400 SYP122, ATSYP122 syntaxin of plants 122 0.03 OrthoFinder output from all 47 species
Cba_g18287 SYP125, ATSYP125 Qa-type SYP1-group component of SNARE membrane fusion... 0.04 OrthoFinder output from all 47 species
Ceric.09G096900.1 SYP125,... Qa-type SYP1-group component of SNARE membrane fusion... 0.03 OrthoFinder output from all 47 species
Ceric.22G024200.1 ATSYP124,... Qa-type SYP1-group component of SNARE membrane fusion... 0.03 OrthoFinder output from all 47 species
Ehy_g01238 ATSYP124, SYP124 Qa-type SYP1-group component of SNARE membrane fusion... 0.04 OrthoFinder output from all 47 species
LOC_Os03g57310.1 SYP121,... SYP1-group Qa-type SNARE component 0.03 OrthoFinder output from all 47 species
LOC_Os06g07200.1 SYP132,... SYP1-group Qa-type SNARE component 0.04 OrthoFinder output from all 47 species
Lfl_g05313 SYP125, ATSYP125 Qa-type SYP1-group component of SNARE membrane fusion... 0.04 OrthoFinder output from all 47 species
Solyc10g081850.3.1 SYP121,... SYP1-group Qa-type SNARE component 0.03 OrthoFinder output from all 47 species
Zm00001e005922_P001 SYP121,... SYP1-group Qa-type SNARE component 0.03 OrthoFinder output from all 47 species
Zm00001e018305_P001 SYP132,... SYP1-group Qa-type SNARE component 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0008037 cell recognition IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009116 nucleoside metabolic process IEP HCCA
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
MF GO:0015297 antiporter activity IEP HCCA
CC GO:0018995 host cellular component IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
CC GO:0033643 host cell part IEP HCCA
CC GO:0033646 host intracellular part IEP HCCA
CC GO:0033647 host intracellular organelle IEP HCCA
CC GO:0033648 host intracellular membrane-bounded organelle IEP HCCA
CC GO:0042025 host cell nucleus IEP HCCA
MF GO:0042910 xenobiotic transmembrane transporter activity IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0048544 recognition of pollen IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901657 glycosyl compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR006011 Syntaxin_N 40 245
IPR000727 T_SNARE_dom 246 298
No external refs found!