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Description : component PININ of RNA quality control Exon Junction complex
Gene families : OG0004599 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004599_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Gb_25268 | |
| Cluster | HCCA: Cluster_98 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00173p00035440 | evm_27.TU.AmTr_v1... | RNA processing.RNA quality control Exon Junction complex... | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g117590 | No alias | component *(PININ) of RNA quality control Exon Junction... | 0.04 | OrthoFinder output from all 47 species | |
| Als_g09559 | No alias | component *(PININ) of RNA quality control Exon Junction... | 0.05 | OrthoFinder output from all 47 species | |
| Aop_g19581 | No alias | component *(PININ) of RNA quality control Exon Junction... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.07G024200.1 | Ceric.07G024200 | component *(PININ) of RNA quality control Exon Junction... | 0.09 | OrthoFinder output from all 47 species | |
| Cre09.g387300 | No alias | RNA processing.RNA quality control Exon Junction complex... | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g48542 | No alias | component *(PININ) of RNA quality control Exon Junction... | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os03g49520.1 | LOC_Os03g49520 | component PININ of RNA quality control Exon Junction complex | 0.08 | OrthoFinder output from all 47 species | |
| Lfl_g08493 | No alias | component *(PININ) of RNA quality control Exon Junction... | 0.02 | OrthoFinder output from all 47 species | |
| MA_49744g0010 | No alias | component PININ of RNA quality control Exon Junction complex | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g15018 | No alias | component *(PININ) of RNA quality control Exon Junction... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc01g104560.3.1 | Solyc01g104560 | component PININ of RNA quality control Exon Junction complex | 0.05 | OrthoFinder output from all 47 species | |
| Spa_g10046 | No alias | component *(PININ) of RNA quality control Exon Junction... | 0.05 | OrthoFinder output from all 47 species | |
| Tin_g10098 | No alias | component *(PININ) of RNA quality control Exon Junction... | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e005379_P001 | Zm00001e005379 | component PININ of RNA quality control Exon Junction complex | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e012229_P001 | Zm00001e012229 | component PININ of RNA quality control Exon Junction complex | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003723 | RNA binding | IEP | HCCA |
| BP | GO:0006396 | RNA processing | IEP | HCCA |
| BP | GO:0006397 | mRNA processing | IEP | HCCA |
| BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
| BP | GO:0016071 | mRNA metabolic process | IEP | HCCA |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |