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  5. Gb_24244

Gb_24244 (MEE32, EMB3004)


Aliases : MEE32, EMB3004

Description : 3-dehydroquinate dehydratase and shikimate dehydrogenase


Gene families : OG0001444 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001444_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: Gb_24244

Target Alias Description ECC score Gene Family Method Actions
AT3G06350 MEE32, EMB3004 dehydroquinate dehydratase, putative / shikimate... 0.03 OrthoFinder output from all 47 species
LOC_Os01g27750.1 MEE32, EMB3004,... 3-dehydroquinate dehydratase and shikimate dehydrogenase 0.04 OrthoFinder output from all 47 species
LOC_Os12g34874.2 MEE32, EMB3004,... 3-dehydroquinate dehydratase and shikimate dehydrogenase 0.03 OrthoFinder output from all 47 species
Solyc01g067750.3.1 MEE32, EMB3004,... 3-dehydroquinate dehydratase and shikimate dehydrogenase 0.05 OrthoFinder output from all 47 species
Solyc10g038080.3.1 MEE32, EMB3004,... 3-dehydroquinate dehydratase and shikimate dehydrogenase 0.03 OrthoFinder output from all 47 species
Zm00001e017662_P001 MEE32, EMB3004,... 3-dehydroquinate dehydratase and shikimate dehydrogenase 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003855 3-dehydroquinate dehydratase activity IEA Interproscan
MF GO:0004764 shikimate 3-dehydrogenase (NADP+) activity IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004190 aspartic-type endopeptidase activity IEP HCCA
MF GO:0005048 signal sequence binding IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006621 protein retention in ER lumen IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008373 sialyltransferase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
BP GO:0032507 maintenance of protein location in cell IEP HCCA
MF GO:0033218 amide binding IEP HCCA
BP GO:0035437 maintenance of protein localization in endoplasmic reticulum IEP HCCA
MF GO:0042277 peptide binding IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0045185 maintenance of protein location IEP HCCA
MF GO:0046923 ER retention sequence binding IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051235 maintenance of location IEP HCCA
BP GO:0051651 maintenance of location in cell IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
MF GO:0070001 aspartic-type peptidase activity IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
BP GO:0072595 maintenance of protein localization in organelle IEP HCCA
InterPro domains Description Start Stop
IPR006151 Shikm_DH/Glu-tRNA_Rdtase 362 434
IPR013708 Shikimate_DH-bd_N 240 320
IPR001381 DHquinase_I 9 225
IPR041121 SDH_C 482 511
No external refs found!