Aliases : RNPS1, SR45
Description : component RNPS1 of RNA quality control Exon Junction complex
Gene families : OG0002814 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002814_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00071p00150630 | RNPS1, SR45,... | RNA processing.RNA quality control Exon Junction complex... | 0.03 | OrthoFinder output from all 47 species | |
Adi_g015310 | No alias | component *(RNPS1) of RNA quality control Exon Junction... | 0.02 | OrthoFinder output from all 47 species | |
Ceric.19G041100.1 | RNPS1, SR45,... | component *(RNPS1) of RNA quality control Exon Junction... | 0.04 | OrthoFinder output from all 47 species | |
Lfl_g18973 | RNPS1, SR45 | component *(RNPS1) of RNA quality control Exon Junction... | 0.03 | OrthoFinder output from all 47 species | |
Ore_g10464 | RNPS1, SR45 | component *(RNPS1) of RNA quality control Exon Junction... | 0.04 | OrthoFinder output from all 47 species | |
Solyc10g005590.4.1 | RNPS1, SR45,... | component RNPS1 of RNA quality control Exon Junction complex | 0.07 | OrthoFinder output from all 47 species | |
Spa_g07702 | RNPS1, SR45 | component *(RNPS1) of RNA quality control Exon Junction... | 0.03 | OrthoFinder output from all 47 species | |
Tin_g01053 | RNPS1, SR45 | component *(RNPS1) of RNA quality control Exon Junction... | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e028289_P001 | RNPS1, SR45,... | component RNPS1 of RNA quality control Exon Junction complex | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003676 | nucleic acid binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003723 | RNA binding | IEP | HCCA |
MF | GO:0004175 | endopeptidase activity | IEP | HCCA |
MF | GO:0004176 | ATP-dependent peptidase activity | IEP | HCCA |
MF | GO:0004252 | serine-type endopeptidase activity | IEP | HCCA |
MF | GO:0005524 | ATP binding | IEP | HCCA |
BP | GO:0006396 | RNA processing | IEP | HCCA |
MF | GO:0008233 | peptidase activity | IEP | HCCA |
MF | GO:0008236 | serine-type peptidase activity | IEP | HCCA |
MF | GO:0017171 | serine hydrolase activity | IEP | HCCA |
MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
MF | GO:0140657 | ATP-dependent activity | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR000504 | RRM_dom | 98 | 165 |
No external refs found! |