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  5. Gb_20080

Gb_20080 (TPS03, ATTPS03)


Aliases : TPS03, ATTPS03

Description : mono-/sesquiterpene-/diterpene synthase


Gene families : OG0000499 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000499_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Type Description Actions
Neighborhood HRR: Gb_20080
Cluster HCCA: Cluster_32

Target Alias Description ECC score Gene Family Method Actions
AT3G25820 ATTPS-CIN, TPS-CIN terpene synthase-like sequence-1,8-cineole 0.03 OrthoFinder output from all 47 species
AT3G25830 ATTPS-CIN, TPS-CIN terpene synthase-like sequence-1,8-cineole 0.03 OrthoFinder output from all 47 species
GSVIVT01000401001 ATTPS-CIN, TPS-CIN Secondary metabolism.terpenoids.terpenoid... 0.03 OrthoFinder output from all 47 species
GSVIVT01013515001 ATTPS-CIN, TPS-CIN (-)-alpha-terpineol synthase OS=Vitis vinifera 0.02 OrthoFinder output from all 47 species
GSVIVT01030646001 TPS10 Secondary metabolism.terpenoids.terpenoid... 0.03 OrthoFinder output from all 47 species
GSVIVT01036320001 ATTPS21, TPS21 Secondary metabolism.terpenoids.terpenoid... 0.01 OrthoFinder output from all 47 species
GSVIVT01036321001 ATTPS21, TPS21 Secondary metabolism.terpenoids.terpenoid... 0.01 OrthoFinder output from all 47 species
GSVIVT01036340001 No alias Secondary metabolism.terpenoids.terpenoid... 0.01 OrthoFinder output from all 47 species
GSVIVT01036373001 ATTPS21, TPS21 Valencene synthase OS=Vitis vinifera 0.02 OrthoFinder output from all 47 species
Gb_09324 TPS02 mono-/sesquiterpene-/diterpene synthase 0.01 OrthoFinder output from all 47 species
Gb_11599 CPS, ATCPS1,... mono-/sesquiterpene-/diterpene synthase 0.06 OrthoFinder output from all 47 species
Gb_13698 ATTPS14, TPS14 Delta-selinene synthase OS=Abies grandis... 0.03 OrthoFinder output from all 47 species
Gb_16024 TPS02 mono-/sesquiterpene-/diterpene synthase 0.05 OrthoFinder output from all 47 species
Gb_16025 TPS03, ATTPS03 mono-/sesquiterpene-/diterpene synthase 0.05 OrthoFinder output from all 47 species
Gb_32501 TPS02 mono-/sesquiterpene-/diterpene synthase 0.04 OrthoFinder output from all 47 species
LOC_Os04g27670.1 ATTPS21, TPS21,... mono-/sesquiterpene-/diterpene synthase 0.03 OrthoFinder output from all 47 species
LOC_Os08g07080.1 LOC_Os08g07080 mono-/sesquiterpene-/diterpene synthase 0.02 OrthoFinder output from all 47 species
MA_10025722g0010 No alias Alpha-bisabolene synthase OS=Abies grandis... 0.04 OrthoFinder output from all 47 species
MA_10430954g0010 ATTPS14, TPS14 mono-/sesquiterpene-/diterpene synthase 0.02 OrthoFinder output from all 47 species
Solyc01g101170.4.1 ATTPS21, TPS21,... mono-/sesquiterpene-/diterpene synthase 0.04 OrthoFinder output from all 47 species
Solyc01g101180.4.1 ATTPS21, TPS21,... mono-/sesquiterpene-/diterpene synthase 0.03 OrthoFinder output from all 47 species
Solyc01g101190.3.1 ATTPS21, TPS21,... mono-/sesquiterpene-/diterpene synthase 0.03 OrthoFinder output from all 47 species
Solyc01g101210.4.1 ATTPS21, TPS21,... mono-/sesquiterpene-/diterpene synthase 0.04 OrthoFinder output from all 47 species
Solyc01g105850.3.1 TPS02, Solyc01g105850 mono-/sesquiterpene-/diterpene synthase 0.04 OrthoFinder output from all 47 species
Solyc01g105860.3.1 Solyc01g105860 (-)-camphene/tricyclene synthase, chloroplastic... 0.04 OrthoFinder output from all 47 species
Solyc01g105870.3.1 Solyc01g105870 mono-/sesquiterpene-/diterpene synthase 0.03 OrthoFinder output from all 47 species
Solyc06g059930.4.1 ATTPS21, TPS21,... mono-/sesquiterpene-/diterpene synthase 0.05 OrthoFinder output from all 47 species
Solyc06g060180.3.1 ATTPS21, TPS21,... mono-/sesquiterpene-/diterpene synthase 0.04 OrthoFinder output from all 47 species
Solyc07g008690.3.1 ATTPS21, TPS21,... mono-/sesquiterpene-/diterpene synthase 0.03 OrthoFinder output from all 47 species
Zm00001e008618_P001 Zm00001e008618 mono-/sesquiterpene-/diterpene synthase 0.02 OrthoFinder output from all 47 species
Zm00001e039929_P001 Zm00001e039929 mono-/sesquiterpene-/diterpene synthase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEA Interproscan
MF GO:0010333 terpene synthase activity IEA Interproscan
MF GO:0016829 lyase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
CC GO:0046658 obsolete anchored component of plasma membrane IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
InterPro domains Description Start Stop
IPR005630 Terpene_synthase_metal-bd 187 401
IPR001906 Terpene_synth_N 8 96
No external refs found!