Aliases : CPS, ATCPS1, ABC33, CPS1, GA1
Description : Alpha-bisabolene synthase OS=Abies grandis (sp|o81086|tpsd1_abigr : 221.0)
Gene families : OG0006488 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006488_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Gb_17941 | |
Cluster | HCCA: Cluster_106 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Dac_g14672 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Dac_g21648 | CPS, ATCPS1,... | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Dac_g30449 | CPS, ATCPS1,... | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Dac_g43445 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01006487001 | TPS04, TPS4, GES | S-linalool synthase OS=Clarkia breweri | 0.03 | OrthoFinder output from all 47 species | |
Gb_13696 | CPS, ATCPS1,... | Alpha-bisabolene synthase OS=Abies grandis... | 0.03 | OrthoFinder output from all 47 species | |
Gb_13703 | CPS, ATCPS1,... | Alpha-bisabolene synthase OS=Abies grandis... | 0.04 | OrthoFinder output from all 47 species | |
Gb_13713 | CPS, ATCPS1,... | Alpha-bisabolene synthase OS=Abies grandis... | 0.04 | OrthoFinder output from all 47 species | |
Gb_36202 | KS, KS1, ATKS1, ATKS, GA2 | Alpha-bisabolene synthase OS=Abies grandis... | 0.02 | OrthoFinder output from all 47 species | |
Gb_39147 | CPS, ATCPS1,... | ent-copalyl diphosphate synthase | 0.04 | OrthoFinder output from all 47 species | |
MA_10431370g0010 | No alias | Bifunctional isopimaradiene synthase, chloroplastic... | 0.03 | OrthoFinder output from all 47 species | |
MA_10435334g0020 | CPS, ATCPS1,... | Alpha-bisabolene synthase OS=Abies grandis... | 0.04 | OrthoFinder output from all 47 species | |
MA_129574g0010 | KS, KS1, ATKS1, ATKS, GA2 | Bifunctional levopimaradiene synthase, chloroplastic... | 0.02 | OrthoFinder output from all 47 species | |
MA_152325g0010 | KS, KS1, ATKS1, ATKS, GA2 | Alpha-bisabolene synthase OS=Abies grandis... | 0.04 | OrthoFinder output from all 47 species | |
MA_34273g0020 | CPS, ATCPS1,... | Alpha-bisabolene synthase OS=Abies grandis... | 0.04 | OrthoFinder output from all 47 species | |
Solyc08g005635.1.1 | KS, KS1, ATKS1,... | Beta-phellandrene synthase... | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000166 | nucleotide binding | IEP | HCCA |
MF | GO:0000287 | magnesium ion binding | IEP | HCCA |
MF | GO:0003674 | molecular_function | IEP | HCCA |
MF | GO:0003824 | catalytic activity | IEP | HCCA |
MF | GO:0004497 | monooxygenase activity | IEP | HCCA |
MF | GO:0004672 | protein kinase activity | IEP | HCCA |
MF | GO:0005488 | binding | IEP | HCCA |
MF | GO:0005515 | protein binding | IEP | HCCA |
MF | GO:0005524 | ATP binding | IEP | HCCA |
CC | GO:0005737 | cytoplasm | IEP | HCCA |
BP | GO:0006020 | inositol metabolic process | IEP | HCCA |
BP | GO:0006066 | alcohol metabolic process | IEP | HCCA |
BP | GO:0006468 | protein phosphorylation | IEP | HCCA |
MF | GO:0010333 | terpene synthase activity | IEP | HCCA |
BP | GO:0016052 | carbohydrate catabolic process | IEP | HCCA |
MF | GO:0016491 | oxidoreductase activity | IEP | HCCA |
MF | GO:0016701 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen | IEP | HCCA |
MF | GO:0016702 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen | IEP | HCCA |
MF | GO:0016829 | lyase activity | IEP | HCCA |
MF | GO:0016835 | carbon-oxygen lyase activity | IEP | HCCA |
MF | GO:0016838 | carbon-oxygen lyase activity, acting on phosphates | IEP | HCCA |
MF | GO:0016887 | ATP hydrolysis activity | IEP | HCCA |
MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
BP | GO:0019310 | inositol catabolic process | IEP | HCCA |
BP | GO:0019751 | polyol metabolic process | IEP | HCCA |
MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
MF | GO:0036094 | small molecule binding | IEP | HCCA |
MF | GO:0043167 | ion binding | IEP | HCCA |
MF | GO:0043168 | anion binding | IEP | HCCA |
MF | GO:0043169 | cation binding | IEP | HCCA |
BP | GO:0044248 | cellular catabolic process | IEP | HCCA |
BP | GO:0044262 | cellular carbohydrate metabolic process | IEP | HCCA |
BP | GO:0044275 | cellular carbohydrate catabolic process | IEP | HCCA |
BP | GO:0044282 | small molecule catabolic process | IEP | HCCA |
BP | GO:0046164 | alcohol catabolic process | IEP | HCCA |
BP | GO:0046174 | polyol catabolic process | IEP | HCCA |
MF | GO:0046872 | metal ion binding | IEP | HCCA |
MF | GO:0050113 | inositol oxygenase activity | IEP | HCCA |
MF | GO:0051213 | dioxygenase activity | IEP | HCCA |
BP | GO:0055114 | obsolete oxidation-reduction process | IEP | HCCA |
MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
BP | GO:1901615 | organic hydroxy compound metabolic process | IEP | HCCA |
BP | GO:1901616 | organic hydroxy compound catabolic process | IEP | HCCA |
No InterPro domains available for this sequence
No external refs found! |