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View using InCHLib : here ( Experimental feature, still under development)
(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)
| Gene | Ovule | Ovule, mature | Ovule, pollinated | Strobilus, female | Ovulate strobilus | Microstrobilus | Kernel | Leaf | Leaf, female | Leaf, male | Leaf, salicylic acid | Leaf, seedling | Leaf, truncation control | Leaf, truncation treatment | Leaf, water | Yellow-green stripe leaves | Green leaves | Stem | Cambium | Root |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.7 | -2.89 | -1.11 | -0.84 | -4.1 | 4.07 | -4.54 | -7.05 | -7.48 | - | - | -8.72 | -3.15 | -5.35 | -6.94 | - | -7.26 | -6.86 | - | -3.07 | |
Gb_01614 (CHIA) | -2.91 | - | - | -1.15 | - | 3.68 | -2.45 | -2.26 | -3.24 | -3.78 | - | -3.88 | - | -2.22 | - | - | -2.48 | -4.02 | -2.9 | 2.42 |
| -5.2 | -2.05 | -2.68 | -2.87 | -2.5 | 3.79 | - | -0.45 | -1.35 | -0.28 | -2.7 | -1.76 | -2.36 | -2.18 | -1.63 | -2.35 | -2.98 | -1.76 | -5.01 | 0.69 | |
| -2.11 | -4.18 | -1.57 | - | -1.01 | 3.65 | - | -0.02 | -0.72 | 0.31 | -1.99 | -1.23 | -2.4 | -2.46 | -1.84 | - | -0.09 | - | -3.32 | 0.21 | |
| -1.9 | -2.58 | -2.06 | - | -3.01 | 3.48 | -3.87 | 0.28 | -0.35 | 0.48 | -1.95 | -1.29 | -2.12 | -1.72 | -2.13 | - | -1.11 | -2.13 | -2.4 | 1.19 | |
| -1.51 | -4.39 | -2.26 | -2.77 | -3.17 | 3.91 | -7.17 | -1.3 | -3.82 | -3.65 | -4.02 | -3.17 | -6.25 | -6.04 | - | -6.27 | -2.82 | -0.03 | -0.87 | 0.72 | |
Gb_02807 (CHX19) | 0.57 | -0.45 | 0.89 | -0.64 | 1.59 | 2.8 | -1.56 | -2.02 | -3.27 | -1.43 | -4.03 | -1.83 | -2.62 | -3.09 | -3.01 | -1.43 | -1.97 | -1.46 | 0.09 | 0.51 |
Gb_02999 (FUS3) | -1.31 | -3.12 | -1.66 | -1.74 | -2.18 | 4.06 | 0.65 | -3.85 | - | - | - | - | - | - | - | - | - | -2.03 | -8.54 | -5.27 |
Gb_03009 (FUS3) | -0.61 | - | -1.09 | - | -1.09 | 3.87 | 0.97 | -3.13 | - | - | - | - | - | - | - | - | - | 0.78 | - | - |
| - | - | - | - | - | 4.32 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| -0.03 | -0.22 | -0.19 | 0.02 | -0.36 | 3.65 | -1.02 | -1.86 | -3.81 | -8.47 | -8.15 | -5.23 | -7.5 | -7.36 | -7.26 | -2.48 | -5.04 | 0.33 | -1.84 | -1.8 | |
Gb_04708 (OPCL1) | -1.19 | - | - | 0.41 | -0.65 | 2.99 | -2.39 | -1.89 | -4.99 | - | - | -5.27 | - | - | - | - | - | 1.65 | -0.11 | 2.35 |
Gb_05492 (ATPT1) | -5.33 | -10.69 | -10.22 | -4.98 | -7.64 | 4.31 | -10.08 | -7.51 | -12.48 | - | -11.95 | - | - | - | - | - | - | -4.5 | - | -3.73 |
Gb_05586 (ORF102) | - | - | 0.63 | - | - | 3.88 | 0.44 | -2.68 | -0.22 | -1.18 | - | -2.32 | - | - | -0.56 | - | - | - | - | - |
| 0.17 | 0.03 | -0.12 | 0.25 | 0.92 | 2.15 | 0.49 | -0.72 | -2.06 | -1.68 | -1.42 | -2.35 | -2.74 | -2.78 | -1.28 | -1.72 | -1.17 | 1.0 | 0.4 | 0.59 | |
| 0.2 | 0.25 | -0.04 | 0.17 | 0.98 | 2.27 | 0.37 | -0.87 | -1.9 | -2.06 | -1.88 | -2.42 | -2.05 | -2.39 | -1.69 | -2.1 | -1.71 | 1.06 | 0.41 | 0.35 | |
Gb_06127 (EXP15) | - | -11.91 | -10.63 | -5.58 | -10.16 | 4.32 | - | -8.68 | - | - | - | - | - | - | - | - | - | -6.51 | -14.48 | -5.24 |
| -5.93 | -5.04 | -5.68 | -3.43 | -6.68 | 4.16 | -2.27 | -1.81 | -2.06 | -1.81 | -3.45 | -5.11 | -3.13 | -4.34 | -4.18 | - | -5.95 | -5.54 | -1.25 | -3.62 | |
| -0.84 | - | - | - | - | 3.73 | 0.03 | -2.82 | -1.66 | -0.35 | - | 1.78 | - | - | - | - | - | -1.06 | - | - | |
Gb_08399 (ADG1) | -0.51 | -2.11 | -2.06 | 0.57 | 0.53 | 3.16 | -0.65 | -1.47 | -3.54 | -6.45 | -2.5 | -3.8 | -5.77 | -6.99 | -3.0 | -1.77 | -2.9 | 1.23 | 1.14 | -1.02 |
Gb_08400 (ADG1) | -0.69 | -1.27 | -2.5 | 0.16 | 0.96 | 3.25 | -0.7 | -1.55 | -3.89 | -5.05 | -2.6 | -4.36 | -4.06 | -3.06 | -2.74 | -3.84 | -2.44 | 1.11 | 0.48 | -0.32 |
| 0.11 | 1.01 | 0.25 | -1.44 | 0.58 | 2.94 | -2.24 | -3.75 | -5.08 | -5.61 | - | -3.63 | -5.83 | -5.49 | -6.07 | -3.15 | -4.01 | 0.09 | 0.45 | 1.64 | |
Gb_10668 (scpl26) | -1.14 | -0.44 | -0.62 | 0.34 | -0.05 | 3.22 | -3.05 | -0.24 | -2.1 | -2.02 | -2.09 | -1.34 | -2.02 | -1.11 | -1.34 | 0.01 | -0.28 | 0.13 | -1.51 | -2.75 |
| 0.96 | 0.4 | 0.99 | 0.23 | -0.01 | 2.22 | -0.84 | -1.01 | -0.87 | -0.93 | -1.07 | -1.36 | -1.93 | -2.05 | -0.53 | -0.45 | -0.42 | -0.19 | -0.45 | -0.63 | |
Gb_11459 (FLS2) | -0.93 | - | - | - | - | 3.89 | -5.2 | -2.39 | -4.3 | -2.8 | - | 0.96 | - | - | -3.56 | -0.42 | 0.39 | - | - | -2.9 |
| -0.55 | -2.65 | -3.13 | -0.83 | -2.14 | 3.14 | -0.1 | -0.46 | -1.61 | -1.57 | -1.36 | 1.59 | -3.14 | -3.9 | -1.92 | 0.74 | 0.32 | -1.61 | - | -4.91 | |
| 0.07 | -1.98 | -0.81 | 0.4 | 0.08 | 2.67 | -1.31 | -0.48 | -0.76 | -1.01 | -0.52 | -0.63 | -0.65 | -0.65 | -0.31 | -0.82 | -0.09 | -0.29 | -0.7 | -0.31 | |
Gb_12364 (PAP10) | 0.46 | -0.34 | -0.06 | 0.56 | 0.37 | 3.32 | -1.13 | -0.96 | -3.17 | -3.0 | -3.43 | -1.12 | -3.37 | -3.42 | -3.12 | -3.07 | -1.7 | 0.23 | -2.45 | -1.76 |
Gb_12468 (TPS02) | -4.64 | - | -5.3 | - | -4.19 | 4.24 | - | -2.25 | -4.66 | -2.87 | - | -1.5 | - | -6.64 | - | - | -5.11 | -2.93 | - | -4.63 |
Gb_12479 (AS2) | -0.24 | 0.17 | 0.34 | -1.0 | -0.74 | 3.55 | 0.4 | -1.78 | -7.52 | -7.83 | -7.43 | -5.82 | -8.34 | -7.11 | -9.16 | -3.49 | -2.85 | -2.25 | -5.65 | 0.85 |
| -4.39 | -4.56 | -3.48 | - | -4.0 | 4.23 | - | -2.69 | -3.68 | -2.86 | - | -1.34 | - | - | - | - | - | -2.3 | -6.36 | -5.98 | |
Gb_14631 (MPK7) | -3.47 | - | - | -2.97 | - | 4.14 | 0.76 | -5.24 | - | - | - | -7.62 | -4.99 | - | -5.9 | - | -5.17 | -5.85 | -2.03 | -3.23 |
Gb_14667 (JAR1) | -0.47 | -0.94 | -1.69 | -0.56 | -0.57 | 2.35 | -0.12 | -0.32 | -0.69 | -0.18 | 0.85 | -1.05 | -1.56 | -1.55 | 0.88 | -0.53 | -0.4 | 0.52 | -0.28 | -2.01 |
Gb_15014 (LOX1) | -2.27 | - | -2.3 | - | -0.11 | 4.03 | -2.95 | -1.16 | -5.58 | - | - | -2.47 | - | -4.55 | -4.41 | - | - | -2.21 | - | 0.27 |
Gb_15015 (LOX1) | -1.64 | -4.46 | -6.29 | -4.58 | -3.03 | 4.22 | -8.31 | -1.64 | -6.52 | -6.95 | -6.33 | -3.98 | -7.07 | -6.18 | - | -6.95 | -6.3 | -2.84 | -4.48 | -2.3 |
| -2.83 | -3.76 | -3.09 | -1.9 | -1.87 | 3.55 | 0.45 | -1.45 | -2.25 | -1.8 | -2.77 | -2.38 | -2.59 | -2.11 | -2.65 | -4.18 | -1.97 | 0.64 | 0.14 | 0.44 | |
Gb_15493 (PDR12) | - | -6.87 | -8.04 | -4.75 | - | 4.32 | -8.65 | -9.16 | - | - | - | - | -9.37 | - | -8.22 | - | - | -8.22 | - | -5.95 |
Gb_15699 (KS) | -4.19 | -3.76 | -2.49 | - | -3.2 | 4.22 | - | -3.2 | -4.45 | -3.33 | -5.68 | -1.74 | -4.63 | -3.3 | - | -3.72 | -4.71 | -3.2 | - | -6.93 |
Gb_16914 (LBD1) | -1.06 | -2.39 | -1.3 | -2.75 | -5.07 | 4.11 | - | -1.11 | -3.19 | -4.36 | - | -2.21 | -5.1 | -3.72 | -6.68 | -3.47 | -1.79 | -3.96 | - | -4.69 |
| - | - | -6.56 | - | - | 4.31 | -3.17 | -10.99 | - | - | -6.48 | - | - | - | - | - | - | - | - | -4.46 | |
Gb_17941 (CPS) | -1.84 | - | - | -1.76 | - | 3.9 | 0.47 | -3.38 | -2.25 | -0.81 | - | 0.75 | - | - | - | -2.77 | -1.38 | - | - | - |
Gb_17949 (HER1) | -0.11 | 0.4 | -0.38 | 0.44 | 0.43 | 1.99 | -0.97 | -0.19 | -1.03 | -1.11 | -0.26 | -0.69 | -0.66 | -0.49 | 0.04 | -1.4 | -1.37 | 0.31 | 0.28 | -0.12 |
| -1.32 | -1.58 | -2.38 | -0.36 | -0.13 | 3.76 | -1.99 | -1.6 | -2.8 | -2.86 | -2.3 | -2.48 | -2.98 | -2.06 | -3.6 | -1.9 | -3.74 | -0.88 | -0.28 | -1.29 | |
| -0.75 | -0.8 | -1.26 | -0.26 | -0.86 | 3.53 | -1.18 | -1.76 | -3.74 | -3.03 | -1.81 | -2.22 | - | - | -2.12 | -1.45 | -4.05 | -0.03 | 0.69 | -0.33 | |
Gb_19024 (ACN1) | 0.79 | 0.19 | 0.4 | -0.11 | -0.57 | 2.44 | -0.15 | -0.88 | -1.26 | -1.27 | -0.37 | -1.7 | -1.47 | -1.36 | -0.64 | -0.91 | -1.01 | -0.86 | -3.09 | 1.23 |
Gb_19720 (SCP) | -4.79 | -6.24 | -4.53 | -3.12 | -4.94 | 4.13 | 1.12 | -7.98 | -9.0 | -8.14 | - | - | - | - | - | - | -7.29 | -6.58 | - | -3.87 |
Gb_20614 (AIR3) | -3.92 | -6.16 | -8.2 | -1.47 | -3.6 | 4.08 | -9.19 | -1.59 | -1.66 | -1.27 | -3.31 | -3.5 | -1.16 | -1.06 | -4.55 | -4.06 | -2.02 | -4.77 | -5.04 | -5.78 |
| 0.36 | -0.24 | 0.06 | -0.55 | -0.23 | 2.45 | -1.57 | -0.07 | -0.67 | -0.8 | 0.03 | -0.61 | -0.76 | -1.15 | 0.05 | -0.39 | -0.65 | -0.75 | -1.66 | 0.35 | |
Gb_21232 (ETFALPHA) | -0.07 | -0.46 | 0.06 | -0.22 | -0.49 | 2.45 | -1.04 | -0.12 | -0.32 | -0.62 | -0.51 | -0.67 | -0.46 | -0.58 | -0.36 | -0.01 | -0.4 | -0.18 | -0.78 | -0.66 |
Gb_22346 (XTH16) | - | - | - | - | -5.35 | 4.31 | - | -8.92 | - | - | - | -6.41 | - | - | - | - | - | - | - | -3.65 |
Gb_24269 (FAS4) | -1.3 | -1.17 | -1.11 | -2.63 | -1.22 | 3.76 | 1.59 | -2.55 | -4.43 | -4.14 | -3.39 | -3.68 | -3.34 | -4.18 | -3.41 | -0.82 | - | -2.13 | -4.23 | - |
Gb_24341 (PIP5K9) | 0.7 | 0.03 | -0.28 | 0.26 | 0.42 | 2.14 | -0.52 | -0.44 | -0.92 | -1.24 | -1.09 | -1.06 | -0.91 | -1.09 | -1.11 | -0.58 | -0.81 | 0.41 | 0.41 | -0.15 |
Gb_24808 (EXPL1) | - | - | - | -5.59 | - | 4.32 | -5.97 | -9.2 | - | - | - | -12.07 | - | - | - | - | - | -6.78 | - | -6.17 |
| - | - | - | - | - | 4.26 | -2.24 | -8.64 | - | - | - | - | - | - | - | - | - | - | - | -0.8 | |
Gb_25662 (TPS02) | -3.24 | -1.43 | -1.0 | - | -2.11 | 4.02 | - | -2.07 | -3.59 | -3.05 | -5.52 | -1.24 | -2.85 | -1.24 | -3.45 | -2.14 | -3.2 | -0.87 | -4.62 | -3.92 |
| -0.97 | -0.47 | -1.82 | -1.93 | -1.22 | 3.44 | 0.52 | -1.12 | -1.76 | -1.9 | -1.01 | -2.16 | -1.6 | -2.09 | -1.31 | -1.52 | -1.16 | -1.11 | -1.0 | 0.08 | |
| -1.05 | -0.83 | -1.45 | -2.04 | -1.57 | 3.55 | 0.06 | -1.27 | -1.54 | -2.23 | -1.49 | -2.07 | -4.45 | -3.28 | -1.34 | -1.03 | -1.25 | -0.71 | -0.48 | -0.15 | |
| 1.04 | 0.07 | 0.17 | 0.93 | 0.22 | 1.84 | -1.24 | -0.66 | -1.76 | -1.42 | -0.58 | -1.49 | -1.87 | -2.14 | -0.39 | -0.86 | -0.44 | 0.65 | 0.23 | 0.09 | |
Gb_32354 (CYP76G1) | - | - | -7.87 | -5.19 | -7.95 | 4.27 | -1.99 | -7.76 | - | - | -6.43 | -9.75 | -7.57 | - | - | -7.25 | - | -8.13 | -7.97 | -1.39 |
| 0.48 | 0.01 | 0.33 | 0.48 | -0.75 | 2.85 | -1.88 | -1.17 | -2.91 | -2.2 | -2.71 | -0.91 | -2.92 | -2.31 | -3.11 | -2.77 | -2.22 | 1.16 | 0.8 | -0.73 | |
Gb_32463 (XYL4) | -6.48 | - | - | -6.14 | -3.2 | 4.29 | -5.65 | -6.72 | -11.41 | -10.7 | -7.5 | -11.24 | -9.93 | -9.73 | -5.35 | -8.68 | -11.69 | -3.09 | -3.34 | -3.91 |
| -6.14 | -7.28 | -10.45 | -6.93 | -6.67 | 4.27 | -7.46 | -4.38 | -12.0 | -10.67 | - | -5.53 | -7.65 | -7.54 | - | -10.74 | -11.33 | -6.16 | -7.67 | -0.78 | |
Gb_33677 (MIOX1) | -1.6 | -2.03 | -4.06 | -4.08 | -3.5 | 4.24 | -7.0 | -6.26 | -11.33 | -10.6 | - | -7.39 | - | -11.29 | - | - | - | -5.75 | -11.43 | -2.03 |
| - | - | - | - | -2.23 | 3.33 | - | -3.0 | - | - | - | - | - | - | - | - | - | - | - | 3.26 | |
Gb_34600 (AIM1) | 0.69 | -0.26 | 0.03 | 0.77 | 0.51 | 2.54 | -1.13 | -0.96 | -2.36 | -2.31 | -2.15 | -1.56 | -3.29 | -2.8 | -2.25 | -1.36 | -1.35 | 0.73 | 0.17 | 0.68 |
| -1.09 | -0.57 | -1.06 | -1.63 | -1.19 | 2.66 | 0.28 | -0.22 | -0.89 | -0.62 | 0.47 | -0.93 | 0.09 | -0.12 | 0.43 | -1.91 | -1.44 | -0.33 | -1.46 | -0.01 | |
| -6.08 | - | - | -3.82 | -2.4 | 4.13 | -4.5 | -0.86 | -2.1 | -1.36 | -3.27 | -2.77 | -2.46 | -2.6 | -3.56 | -4.32 | -2.26 | -7.28 | -6.58 | -5.08 | |
| -6.03 | -7.2 | -8.07 | -6.61 | - | 4.25 | -4.55 | -2.53 | -5.23 | -4.31 | -4.45 | -6.26 | -3.29 | -4.39 | -4.52 | - | - | -5.65 | -8.24 | -1.39 | |
Gb_37567 (XRCC3) | 1.0 | -0.29 | 1.01 | 0.72 | 0.64 | 2.23 | -0.04 | -1.2 | -2.57 | -1.7 | -0.88 | -2.34 | -2.1 | -1.72 | -0.55 | -0.91 | -1.74 | -0.01 | -0.19 | -0.43 |
| -7.55 | -7.46 | -8.48 | -5.34 | - | 4.29 | -1.4 | -6.15 | - | - | - | -8.12 | -9.8 | -10.09 | - | - | - | -6.79 | -10.04 | -4.18 | |
| 0.04 | - | -0.78 | - | - | 3.8 | 1.74 | -3.22 | -4.47 | - | - | -3.27 | -3.23 | - | -1.48 | - | - | - | -2.76 | -1.98 | |
Gb_38471 (KS) | -2.08 | -2.13 | -1.71 | -4.32 | -2.06 | 3.85 | -6.87 | -1.7 | -2.42 | -0.7 | -2.27 | -0.45 | -1.55 | 0.07 | -3.38 | -3.0 | -2.38 | -0.67 | -7.64 | -3.87 |
Gb_38839 (RLP50) | -2.04 | -3.23 | -3.0 | -1.7 | -3.78 | 4.08 | -3.23 | -2.47 | -2.69 | -2.26 | -1.9 | -3.52 | -6.03 | -4.8 | -1.78 | -2.97 | -3.22 | -1.94 | -3.92 | -1.88 |
Gb_38997 (MAPKKK15) | -2.03 | -0.77 | -1.58 | -1.81 | -1.36 | 3.36 | 0.9 | -1.88 | -1.6 | -1.04 | 0.38 | -2.14 | -1.79 | -2.41 | 0.22 | -1.41 | -1.33 | -1.42 | -1.18 | -2.29 |
| -1.22 | -2.47 | -1.15 | -1.44 | -1.82 | 4.03 | -5.27 | -4.28 | -5.7 | -6.31 | -6.35 | -4.97 | -10.33 | -8.06 | - | -3.53 | -3.88 | -1.29 | -0.94 | -0.58 | |
| -7.69 | - | -6.34 | - | -4.54 | 4.27 | -5.82 | -2.96 | -4.31 | -4.28 | -5.77 | -4.6 | -4.19 | -4.06 | -5.11 | -5.09 | -2.77 | -5.17 | -7.7 | -4.49 | |
| 0.41 | -1.3 | 0.42 | -2.35 | -0.52 | 3.44 | - | -0.92 | -4.37 | -3.3 | -4.32 | 0.26 | -6.27 | -4.34 | - | -3.69 | 0.67 | -2.2 | -1.87 | -0.0 | |
Gb_41005 (NIK3) | - | - | - | - | - | 3.97 | - | - | - | - | - | - | - | - | - | - | - | - | - | 2.11 |
| 1.26 | -0.85 | 0.91 | 1.1 | 0.79 | 2.18 | -1.58 | -1.02 | -2.34 | -2.19 | -1.98 | -1.4 | -2.57 | -2.15 | -1.74 | -2.18 | -1.71 | 0.05 | 0.43 | 0.38 |
Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.