Gb_16830


Description : no hits & (original description: none)


Gene families : OG0006481 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006481_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_16830
Cluster HCCA: Cluster_51

Target Alias Description ECC score Gene Family Method Actions
AT3G03130 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.11 OrthoFinder output from all 47 species
AT5G17160 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.1 OrthoFinder output from all 47 species
Ala_g32789 No alias not classified & original description: none 0.13 OrthoFinder output from all 47 species
Als_g15657 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g16283 No alias not classified & original description: none 0.12 OrthoFinder output from all 47 species
Aop_g62128 No alias not classified & original description: none 0.14 OrthoFinder output from all 47 species
Aspi01Gene08035.t1 Aspi01Gene08035 not classified & original description: none 0.11 OrthoFinder output from all 47 species
Aspi01Gene08037.t1 Aspi01Gene08037 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Azfi_s0096.g043713 No alias not classified & original description: CDS=597-5744 0.03 OrthoFinder output from all 47 species
Ceric.03G030800.1 Ceric.03G030800 not classified & original description: pacid=50572768... 0.1 OrthoFinder output from all 47 species
Ceric.07G081100.1 Ceric.07G081100 not classified & original description: pacid=50626442... 0.11 OrthoFinder output from all 47 species
Dac_g36794 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g04995 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Dcu_g12086 No alias not classified & original description: none 0.11 OrthoFinder output from all 47 species
GSVIVT01024444001 No alias No description available 0.06 OrthoFinder output from all 47 species
LOC_Os02g47130.1 LOC_Os02g47130 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Len_g48216 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Len_g56690 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Lfl_g31005 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Mp1g15160.1 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Mp2g02190.1 No alias no hits & (original description: none) 0.12 OrthoFinder output from all 47 species
Mp5g07650.1 No alias no hits & (original description: none) 0.12 OrthoFinder output from all 47 species
Msp_g42691 No alias not classified & original description: none 0.13 OrthoFinder output from all 47 species
Nbi_g22125 No alias not classified & original description: none 0.17 OrthoFinder output from all 47 species
Ppi_g18916 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Smo407604 No alias No description available 0.03 OrthoFinder output from all 47 species
Smo421779 No alias No description available 0.11 OrthoFinder output from all 47 species
Solyc04g071660.3.1 Solyc04g071660 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Solyc06g072810.4.1 Solyc06g072810 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Spa_g37185 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Spa_g37186 No alias not classified & original description: none 0.12 OrthoFinder output from all 47 species
Spa_g47628 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g51165 No alias not classified & original description: none 0.12 OrthoFinder output from all 47 species
Tin_g31094 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e006226_P001 Zm00001e006226 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Zm00001e015539_P004 Zm00001e015539 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
Zm00001e023298_P003 Zm00001e023298 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0003916 DNA topoisomerase activity IEP HCCA
MF GO:0003918 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006265 DNA topological change IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
CC GO:0018995 host cellular component IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
CC GO:0033643 host cell part IEP HCCA
CC GO:0033646 host intracellular part IEP HCCA
CC GO:0033647 host intracellular organelle IEP HCCA
CC GO:0033648 host intracellular membrane-bounded organelle IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
CC GO:0042025 host cell nucleus IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!