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Gb_16018


Description : clade D phosphatase


Gene families : OG0000288 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000288_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_16018

Target Alias Description ECC score Gene Family Method Actions
Dde_g09351 No alias clade D phosphatase & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g17242 No alias clade D phosphatase & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01006890001 No alias Protein modification.dephosphorylation.serine/threonine... 0.03 OrthoFinder output from all 47 species
LOC_Os03g55320.1 LOC_Os03g55320 clade D phosphatase 0.02 OrthoFinder output from all 47 species
Len_g45442 No alias clade D phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
MA_10324377g0010 No alias clade D phosphatase 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0024.g008989 No alias clade D phosphatase & original description: CDS=141-1328 0.02 OrthoFinder output from all 47 species
Spa_g29569 No alias clade D phosphatase & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g01735 No alias clade D phosphatase & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g24237 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e013293_P001 Zm00001e013293 clade D phosphatase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001932 PPM-type_phosphatase-like_dom 62 181
No external refs found!