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  5. Gb_15502

Gb_15502 (RBCL)


Aliases : RBCL

Description : Ribulose bisphosphate carboxylase large chain OS=Pseudolarix amabilis (sp|p24681|rbl_psead : 311.0)


Gene families : OG0002607 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002607_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_15502
Cluster HCCA: Cluster_66

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00272640 evm_27.TU.AmTr_v1... Ribulose bisphosphate carboxylase large chain OS=Nymphaea alba 0.06 OrthoFinder output from all 47 species
AMTR_s00012p00184400 RBCL,... Ribulose bisphosphate carboxylase large chain... 0.07 OrthoFinder output from all 47 species
AMTR_s00334p00013200 RBCL,... Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat... 0.03 OrthoFinder output from all 47 species
AMTR_s00606p00006850 RBCL,... Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat... 0.06 OrthoFinder output from all 47 species
AT2G07732 No alias Ribulose bisphosphate carboxylase large chain, catalytic domain 0.02 OrthoFinder output from all 47 species
ATCG00490 RBCL ribulose-bisphosphate carboxylases 0.16 OrthoFinder output from all 47 species
ATMG00280 ORF110A Ribulose bisphosphate carboxylase large chain, catalytic domain 0.1 OrthoFinder output from all 47 species
Aev_g01070 RBCL large subunit of ribulose-1,5-bisphosphat... 0.22 OrthoFinder output from all 47 species
Als_g11735 RBCL large subunit of ribulose-1,5-bisphosphat... 0.03 OrthoFinder output from all 47 species
Cba_g06423 RBCL large subunit of ribulose-1,5-bisphosphat... 0.05 OrthoFinder output from all 47 species
Ceric.02G014200.1 RBCL, Ceric.02G014200 large subunit of ribulose-1,5-bisphosphat... 0.1 OrthoFinder output from all 47 species
Ceric.02G046100.1 RBCL, Ceric.02G046100 large subunit of ribulose-1,5-bisphosphat... 0.03 OrthoFinder output from all 47 species
Ceric.11G074700.1 RBCL, Ceric.11G074700 not classified & original description: pacid=50596717... 0.02 OrthoFinder output from all 47 species
Ceric.11G075000.1 RBCL, Ceric.11G075000 not classified & original description: pacid=50595488... 0.06 OrthoFinder output from all 47 species
Ceric.16G059900.1 RBCL, Ceric.16G059900 not classified & original description: pacid=50589806... 0.04 OrthoFinder output from all 47 species
Ceric.1Z018000.1 RBCL, Ceric.1Z018000 not classified & original description: pacid=50586374... 0.04 OrthoFinder output from all 47 species
Ceric.1Z021900.1 RBCL, Ceric.1Z021900 large subunit of ribulose-1,5-bisphosphat... 0.08 OrthoFinder output from all 47 species
Ceric.1Z141800.1 RBCL, Ceric.1Z141800 large subunit of ribulose-1,5-bisphosphat... 0.04 OrthoFinder output from all 47 species
Ceric.1Z162100.1 RBCL, Ceric.1Z162100 large subunit of ribulose-1,5-bisphosphat... 0.01 OrthoFinder output from all 47 species
Ceric.29G033400.1 RBCL, Ceric.29G033400 large subunit of ribulose-1,5-bisphosphat... 0.12 OrthoFinder output from all 47 species
Ceric.35G017400.1 RBCL, Ceric.35G017400 not classified & original description: pacid=50581736... 0.09 OrthoFinder output from all 47 species
Ceric.36G040400.1 RBCL, Ceric.36G040400 not classified & original description: pacid=50569251... 0.04 OrthoFinder output from all 47 species
Ceric.38G006500.1 RBCL, Ceric.38G006500 large subunit of ribulose-1,5-bisphosphat... 0.11 OrthoFinder output from all 47 species
Dcu_g16071 RBCL large subunit of ribulose-1,5-bisphosphat... 0.05 OrthoFinder output from all 47 species
Dde_g00694 RBCL large subunit of ribulose-1,5-bisphosphat... 0.02 OrthoFinder output from all 47 species
Ehy_g08300 RBCL large subunit of ribulose-1,5-bisphosphat... 0.02 OrthoFinder output from all 47 species
GSVIVT01013856001 RBCL Ribulose bisphosphate carboxylase large chain (Fragment)... 0.11 OrthoFinder output from all 47 species
GSVIVT01022403001 RBCL Ribulose bisphosphate carboxylase large chain OS=Sesbania sesban 0.08 OrthoFinder output from all 47 species
Gb_18620 RBCL Ribulose bisphosphate carboxylase large chain... 0.04 OrthoFinder output from all 47 species
Gb_25934 RBCL Ribulose bisphosphate carboxylase large chain... 0.01 OrthoFinder output from all 47 species
LOC_Os01g58020.1 RBCL, LOC_Os01g58020 Ribulose bisphosphate carboxylase large chain OS=Oryza... 0.11 OrthoFinder output from all 47 species
LOC_Os05g35330.1 RBCL, LOC_Os05g35330 Ribulose bisphosphate carboxylase large chain OS=Oryza... 0.03 OrthoFinder output from all 47 species
LOC_Os10g21268.1 RBCL, LOC_Os10g21268 large subunit of ribulose-1,5-bisphosphat... 0.15 OrthoFinder output from all 47 species
LOC_Os11g32770.1 LOC_Os11g32770 Ribulose bisphosphate carboxylase large chain OS=Oryza... 0.06 OrthoFinder output from all 47 species
LOC_Os12g10580.1 RBCL, LOC_Os12g10580 component psRPS15 of small ribosomal subunit proteome 0.15 OrthoFinder output from all 47 species
Len_g01809 RBCL large subunit of ribulose-1,5-bisphosphat... 0.03 OrthoFinder output from all 47 species
Lfl_g07296 RBCL large subunit of ribulose-1,5-bisphosphat... 0.13 OrthoFinder output from all 47 species
MA_103636g0010 RBCL Ribulose bisphosphate carboxylase large chain... 0.05 OrthoFinder output from all 47 species
Mp3g01300.1 No alias no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Msp_g16802 RBCL large subunit of ribulose-1,5-bisphosphat... 0.03 OrthoFinder output from all 47 species
Nbi_g02076 RBCL large subunit of ribulose-1,5-bisphosphat... 0.02 OrthoFinder output from all 47 species
Ore_g01544 RBCL large subunit of ribulose-1,5-bisphosphat... 0.13 OrthoFinder output from all 47 species
Pir_g10235 RBCL large subunit of ribulose-1,5-bisphosphat... 0.03 OrthoFinder output from all 47 species
Ppi_g08990 RBCL large subunit of ribulose-1,5-bisphosphat... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0004.g002257 RBCL not classified & original description: CDS=1-450 0.07 OrthoFinder output from all 47 species
Sacu_v1.1_s0313.g027218 RBCL not classified & original description: CDS=1-270 0.08 OrthoFinder output from all 47 species
Sam_g02085 No alias large subunit of ribulose-1,5-bisphosphat... 0.05 OrthoFinder output from all 47 species
Smo137874 RBCL Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat... 0.13 OrthoFinder output from all 47 species
Solyc00g500063.1.1 RBCL, Solyc00g500063 large subunit of ribulose-1,5-bisphosphat... 0.14 OrthoFinder output from all 47 species
Solyc07g021200.1.1 RBCL, Solyc07g021200 Ribulose bisphosphate carboxylase large chain (Fragment)... 0.09 OrthoFinder output from all 47 species
Solyc12g062540.3.1 RBCL, Solyc12g062540 Ribulose bisphosphate carboxylase large chain (Fragment)... 0.01 OrthoFinder output from all 47 species
Solyc12g062550.1.1 RBCL, Solyc12g062550 Ribulose bisphosphate carboxylase large chain OS=Solanum... 0.01 OrthoFinder output from all 47 species
Spa_g17352 RBCL large subunit of ribulose-1,5-bisphosphat... 0.03 OrthoFinder output from all 47 species
Zm00001e002755_P001 RBCL, Zm00001e002755 Ribulose bisphosphate carboxylase large chain OS=Zea... 0.02 OrthoFinder output from all 47 species
Zm00001e031080_P001 RBCL, Zm00001e031080 Ribulose bisphosphate carboxylase large chain OS=Zea... 0.09 OrthoFinder output from all 47 species
Zm00001e042029_P001 RBCL, Zm00001e042029 large subunit of ribulose-1,5-bisphosphat... 0.09 OrthoFinder output from all 47 species
Zm00001e042051_P001 RBCL, Zm00001e042051 large subunit of ribulose-1,5-bisphosphat... 0.08 OrthoFinder output from all 47 species
Zm00001e042083_P001 RBCL, Zm00001e042083 large subunit of ribulose-1,5-bisphosphat... 0.08 OrthoFinder output from all 47 species
Zm00001e042095_P001 RBCL, Zm00001e042095 large subunit of ribulose-1,5-bisphosphat... 0.08 OrthoFinder output from all 47 species
Zm00001e042403_P001 RBCL, Zm00001e042403 large subunit of ribulose-1,5-bisphosphat... 0.08 OrthoFinder output from all 47 species
Zm00001e042465_P001 RBCL, Zm00001e042465 Ribulose bisphosphate carboxylase large chain OS=Zea... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006720 isoprenoid metabolic process IEP HCCA
BP GO:0006754 ATP biosynthetic process IEP HCCA
BP GO:0008299 isoprenoid biosynthetic process IEP HCCA
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009152 purine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009260 ribonucleotide biosynthetic process IEP HCCA
BP GO:0015986 proton motive force-driven ATP synthesis IEP HCCA
MF GO:0045735 nutrient reservoir activity IEP HCCA
BP GO:0046390 ribose phosphate biosynthetic process IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR000685 RuBisCO_lsu_C 1 143
No external refs found!