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  5. Gb_13243

Gb_13243 (RPS2)


Aliases : RPS2

Description : component mtRPS2 of small ribosomal subunit proteome


Gene families : OG0011371 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0011371_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_13243
Cluster HCCA: Cluster_22

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00235p00022600 evm_27.TU.AmTr_v1... Protein biosynthesis.organelle translation... 0.08 OrthoFinder output from all 47 species
LOC_Os12g33954.1 RPS2, LOC_Os12g33954 component mtRPS2 of small ribosomal subunit proteome 0.13 OrthoFinder output from all 47 species
LOC_Os12g34092.1 RPS2, LOC_Os12g34092 component mtRPS2 of small ribosomal subunit proteome 0.13 OrthoFinder output from all 47 species
Pir_g61518 No alias component *(uS2m) of small mitoribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Zm00001e037358_P001 RPS2, Zm00001e037358 component mtRPS2 of small ribosomal subunit proteome 0.07 OrthoFinder output from all 47 species
Zm00001e042114_P001 RPS2, Zm00001e042114 component mtRPS2 of small ribosomal subunit proteome 0.08 OrthoFinder output from all 47 species
Zm00001e042303_P001 RPS2, Zm00001e042303 component mtRPS2 of small ribosomal subunit proteome 0.07 OrthoFinder output from all 47 species
Zm00001e042306_P001 RPS2, Zm00001e042306 component mtRPS2 of small ribosomal subunit proteome 0.07 OrthoFinder output from all 47 species
Zm00001e042406_P001 RPS2, Zm00001e042406 component mtRPS2 of small ribosomal subunit proteome 0.07 OrthoFinder output from all 47 species
Zm00001e042408_P001 RPS2, Zm00001e042408 component mtRPS2 of small ribosomal subunit proteome 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0006754 ATP biosynthetic process IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009152 purine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
BP GO:0009260 ribonucleotide biosynthetic process IEP HCCA
BP GO:0015986 proton motive force-driven ATP synthesis IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046390 ribose phosphate biosynthetic process IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
BP GO:1902600 proton transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR001865 Ribosomal_S2 16 196
No external refs found!