1. Home
  2. Species
  3. Ginkgo biloba
  4. Sequence
  5. Gb_12468

Gb_12468 (TPS02)


Aliases : TPS02

Description : mono-/sesquiterpene-/diterpene synthase


Gene families : OG0006488 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006488_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_12468
Cluster HCCA: Cluster_106

Target Alias Description ECC score Gene Family Method Actions
Dac_g14672 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g21648 CPS, ATCPS1,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g29134 CPS, ATCPS1,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g30449 CPS, ATCPS1,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g43445 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_13696 CPS, ATCPS1,... Alpha-bisabolene synthase OS=Abies grandis... 0.03 OrthoFinder output from all 47 species
Gb_13703 CPS, ATCPS1,... Alpha-bisabolene synthase OS=Abies grandis... 0.04 OrthoFinder output from all 47 species
Gb_13713 CPS, ATCPS1,... Alpha-bisabolene synthase OS=Abies grandis... 0.03 OrthoFinder output from all 47 species
Gb_15692 KS, KS1, ATKS1, ATKS, GA2 Alpha-bisabolene synthase OS=Abies grandis... 0.04 OrthoFinder output from all 47 species
Gb_36202 KS, KS1, ATKS1, ATKS, GA2 Alpha-bisabolene synthase OS=Abies grandis... 0.01 OrthoFinder output from all 47 species
Gb_39147 CPS, ATCPS1,... ent-copalyl diphosphate synthase 0.04 OrthoFinder output from all 47 species
Lfl_g23246 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10431370g0010 No alias Bifunctional isopimaradiene synthase, chloroplastic... 0.04 OrthoFinder output from all 47 species
MA_10435334g0020 CPS, ATCPS1,... Alpha-bisabolene synthase OS=Abies grandis... 0.04 OrthoFinder output from all 47 species
MA_129574g0010 KS, KS1, ATKS1, ATKS, GA2 Bifunctional levopimaradiene synthase, chloroplastic... 0.04 OrthoFinder output from all 47 species
MA_152325g0010 KS, KS1, ATKS1, ATKS, GA2 Alpha-bisabolene synthase OS=Abies grandis... 0.04 OrthoFinder output from all 47 species
MA_176370g0020 No alias Bifunctional isopimaradiene synthase, chloroplastic... 0.02 OrthoFinder output from all 47 species
MA_34273g0020 CPS, ATCPS1,... Alpha-bisabolene synthase OS=Abies grandis... 0.07 OrthoFinder output from all 47 species
Ore_g31705 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g34951 CPS, ATCPS1,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g36956 CPS, ATCPS1,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g03163 CPS, ATCPS1,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g08618 CPS, ATCPS1,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g63465 CPS, ATCPS1,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc03g006545.1.1 KS, KS1, ATKS1,... Ent-kaur-16-ene synthase, chloroplastic OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Solyc08g005635.1.1 KS, KS1, ATKS1,... Beta-phellandrene synthase... 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEA Interproscan
MF GO:0010333 terpene synthase activity IEA Interproscan
MF GO:0016829 lyase activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003993 acid phosphatase activity IEP HCCA
MF GO:0004144 diacylglycerol O-acyltransferase activity IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0008134 transcription factor binding IEP HCCA
MF GO:0008374 O-acyltransferase activity IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016411 acylglycerol O-acyltransferase activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
MF GO:0017025 TBP-class protein binding IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
BP GO:0045017 glycerolipid biosynthetic process IEP HCCA
BP GO:0046486 glycerolipid metabolic process IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140296 general transcription initiation factor binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR001906 Terpene_synth_N 324 393
IPR005630 Terpene_synthase_metal-bd 436 490
No external refs found!