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  5. Gb_12261

Gb_12261 (QWRF4)


Aliases : QWRF4

Description : QWRF motif-containing protein 4 OS=Arabidopsis thaliana (sp|f4inp9|qwrf4_arath : 133.0)


Gene families : OG0000808 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000808_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_12261

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00061p00037320 EDE1, QWRF5,... Cytoskeleton.microtubular network.microtubule Tubulin... 0.03 OrthoFinder output from all 47 species
AMTR_s00137p00083250 QWRF2,... Cytoskeleton.microtubular network.microtubule Tubulin... 0.03 OrthoFinder output from all 47 species
Adi_g014772 SCO3, QWRF1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g085046 QWRF8 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g125044 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g47588 QWRF2 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aob_g19947 QWRF4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g11099 QWRF2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g68497 SCO3, QWRF1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene21586.t1 QWRF9, Aspi01Gene21586 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene58202.t1 QWRF8, Aspi01Gene58202 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01009361001 QWRF2 QWRF motif-containing protein 2 OS=Arabidopsis thaliana 0.11 OrthoFinder output from all 47 species
GSVIVT01037854001 QWRF2 Protein SNOWY COTYLEDON 3 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
LOC_Os03g10820.1 QWRF2, LOC_Os03g10820 QWRF motif-containing protein 2 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os08g34320.1 QWRF8, LOC_Os08g34320 AUGMIN subunit 8 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os10g20510.1 QWRF2, LOC_Os10g20510 Protein SNOWY COTYLEDON 3 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Len_g55397 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g45550 SCO3, QWRF1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g19963 QWRF2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g26567 SCO3, QWRF1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g56201 QWRF8 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e000731_P001 QWRF2, Zm00001e000731 Protein SNOWY COTYLEDON 3 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Zm00001e004894_P001 QWRF4, Zm00001e004894 QWRF motif-containing protein 3 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e022159_P001 QWRF4, Zm00001e022159 QWRF motif-containing protein 4 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004568 chitinase activity IEP HCCA
BP GO:0006022 aminoglycan metabolic process IEP HCCA
BP GO:0006026 aminoglycan catabolic process IEP HCCA
BP GO:0006030 chitin metabolic process IEP HCCA
BP GO:0006032 chitin catabolic process IEP HCCA
BP GO:0006040 amino sugar metabolic process IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0010215 cellulose microfibril organization IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
BP GO:0016998 cell wall macromolecule catabolic process IEP HCCA
BP GO:0030198 extracellular matrix organization IEP HCCA
CC GO:0031225 obsolete anchored component of membrane IEP HCCA
BP GO:0043062 extracellular structure organization IEP HCCA
BP GO:0044036 cell wall macromolecule metabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
BP GO:0046348 amino sugar catabolic process IEP HCCA
MF GO:0051087 chaperone binding IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:1901071 glucosamine-containing compound metabolic process IEP HCCA
BP GO:1901072 glucosamine-containing compound catabolic process IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901136 carbohydrate derivative catabolic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR007573 QWRF 433 636
IPR007573 QWRF 740 834
IPR007573 QWRF 676 726
No external refs found!